Gene Slin_0249 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSlin_0249 
Symbol 
ID8723977 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSpirosoma linguale DSM 74 
KingdomBacteria 
Replicon accessionNC_013730 
Strand
Start bp326856 
End bp328220 
Gene Length1365 bp 
Protein Length454 aa 
Translation table11 
GC content48% 
IMG OID 
Producthypothetical protein 
Protein accessionYP_003385113 
Protein GI284035183 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value0.639683 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones17 
Fosmid unclonability p-value0.00118438 
Fosmid HitchhikerNo 
Fosmid clonabilitydecreased coverage 
 

Sequence

Gene sequence
ATGAACTTCC TGACTTATAG CCGTTTGGCT TTAACCGTTG GCCTTTCAGC CCTTTTTTTA 
CATATGGTGT CTTGTAGTAA AGACACTACC GAGTCATTGA CCACAACGGA AACATCTTCG
TTTGATCTTA TTCAGCAAAA AATCCTGACG CCTTCCTGCG CTACGTCGGG CTGCCACTTA
TCAGATAAAG ATGCTACGTA CTTTCAGCAT GGGCTGGTAT TAGCAGAAGG TGTCGCTTAC
CAAAACCTGG TGGGTGTTGA TCCAAAAAAC AGTAGTGCTA AGGCAGACGG CTTCAAGCGA
GTGAAAGCGT ATGCTTCACT GGAGAGTTTG CTCTATCATA AAATAACAAC AACTGCCGGC
CATCATAGCG GTAAACAATA CGGAAATCCA ATGCCATTGG GCGGAGTCGC CCTATCTGAC
GGGCAGGTTG AGTTTGTGCG TCGCTGGATA GATGCTGGTG CGCCCAAAAC AGGCACTATT
GCTGATGCTA CCTTATTGAA TGACAAAACG GTTTCCGAGG CAGCTTACGA ACCATTAACG
GTGCCTGCGG CCGGAACTGG TTTTCAGATG GCCGTTCCCT CGTTCGATAT ACAGCCGAAT
TTTGAACGGG AGTTGTTTAC CCGGAAAATG CTCGGCAATA CACAGGATGT GTACGTAAAT
CGCTATGAGA CCAAGATGCG GAGTGGGAGC CACCATTTTG TTGCGTATGA TTTCCGCAAT
AAAGCCCTTT TGCCTAACCT GAATGACATC CGCGATTTAC GTAACCCTGA TAATTCTCTG
AATATATTAA CTGCTCTGAC TATGTCGAAC CATGTGTATC TGGCGGGTTC GCAGGCGCAG
TATCAGGACT ACGTATTCCC CGAGGGAGCC GCCTTGCTTA TTCCGGCGGG GGCTTCGTTC
GATCTTAACT CGCACTTCGT TAATAAAACT ACGGGAGTAC GTAAGGGGGA AGCCCAGATC
AACCTGTATA CGGTCGATAA GGCAAAAGTG AAAAACATCG TTCAGACGCT CGATCTGAGT
AATACAAATC TGACACTTCC CGCCAATACC CGGGTGACGC TCACCAAAAC GTTTACCTTC
AGCAAGCCCC GGAAGGTGCT TACCCTCACG TCGCATATGC ACAAGCTGGG TGAGAAGTTT
GTGATCAAAA TCGTGGGTGG AGCCCGCAAC GGTGAAATCG TTTATACCTC TACCGACTGG
GAAAACCCTG AAATTATCAC CTTCAAAACC CCCATCGACC TGCAAAAAGG GGAAGGGCTC
ATGTCTGAAA TAACCTATAA TAATACCACC AGCAAAGCCG TCAGCTTCGG CTTGACGAGT
GAAGATGAAA TGGGTATTAT TTTCGGGTAT TATTACGAGG AATAG
 
Protein sequence
MNFLTYSRLA LTVGLSALFL HMVSCSKDTT ESLTTTETSS FDLIQQKILT PSCATSGCHL 
SDKDATYFQH GLVLAEGVAY QNLVGVDPKN SSAKADGFKR VKAYASLESL LYHKITTTAG
HHSGKQYGNP MPLGGVALSD GQVEFVRRWI DAGAPKTGTI ADATLLNDKT VSEAAYEPLT
VPAAGTGFQM AVPSFDIQPN FERELFTRKM LGNTQDVYVN RYETKMRSGS HHFVAYDFRN
KALLPNLNDI RDLRNPDNSL NILTALTMSN HVYLAGSQAQ YQDYVFPEGA ALLIPAGASF
DLNSHFVNKT TGVRKGEAQI NLYTVDKAKV KNIVQTLDLS NTNLTLPANT RVTLTKTFTF
SKPRKVLTLT SHMHKLGEKF VIKIVGGARN GEIVYTSTDW ENPEIITFKT PIDLQKGEGL
MSEITYNNTT SKAVSFGLTS EDEMGIIFGY YYEE