Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Slin_0249 |
Symbol | |
ID | 8723977 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Spirosoma linguale DSM 74 |
Kingdom | Bacteria |
Replicon accession | NC_013730 |
Strand | + |
Start bp | 326856 |
End bp | 328220 |
Gene Length | 1365 bp |
Protein Length | 454 aa |
Translation table | 11 |
GC content | 48% |
IMG OID | |
Product | hypothetical protein |
Protein accession | YP_003385113 |
Protein GI | 284035183 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 18 |
Plasmid unclonability p-value | 0.639683 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 17 |
Fosmid unclonability p-value | 0.00118438 |
Fosmid Hitchhiker | No |
Fosmid clonability | decreased coverage |
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Sequence |
Gene sequence | ATGAACTTCC TGACTTATAG CCGTTTGGCT TTAACCGTTG GCCTTTCAGC CCTTTTTTTA CATATGGTGT CTTGTAGTAA AGACACTACC GAGTCATTGA CCACAACGGA AACATCTTCG TTTGATCTTA TTCAGCAAAA AATCCTGACG CCTTCCTGCG CTACGTCGGG CTGCCACTTA TCAGATAAAG ATGCTACGTA CTTTCAGCAT GGGCTGGTAT TAGCAGAAGG TGTCGCTTAC CAAAACCTGG TGGGTGTTGA TCCAAAAAAC AGTAGTGCTA AGGCAGACGG CTTCAAGCGA GTGAAAGCGT ATGCTTCACT GGAGAGTTTG CTCTATCATA AAATAACAAC AACTGCCGGC CATCATAGCG GTAAACAATA CGGAAATCCA ATGCCATTGG GCGGAGTCGC CCTATCTGAC GGGCAGGTTG AGTTTGTGCG TCGCTGGATA GATGCTGGTG CGCCCAAAAC AGGCACTATT GCTGATGCTA CCTTATTGAA TGACAAAACG GTTTCCGAGG CAGCTTACGA ACCATTAACG GTGCCTGCGG CCGGAACTGG TTTTCAGATG GCCGTTCCCT CGTTCGATAT ACAGCCGAAT TTTGAACGGG AGTTGTTTAC CCGGAAAATG CTCGGCAATA CACAGGATGT GTACGTAAAT CGCTATGAGA CCAAGATGCG GAGTGGGAGC CACCATTTTG TTGCGTATGA TTTCCGCAAT AAAGCCCTTT TGCCTAACCT GAATGACATC CGCGATTTAC GTAACCCTGA TAATTCTCTG AATATATTAA CTGCTCTGAC TATGTCGAAC CATGTGTATC TGGCGGGTTC GCAGGCGCAG TATCAGGACT ACGTATTCCC CGAGGGAGCC GCCTTGCTTA TTCCGGCGGG GGCTTCGTTC GATCTTAACT CGCACTTCGT TAATAAAACT ACGGGAGTAC GTAAGGGGGA AGCCCAGATC AACCTGTATA CGGTCGATAA GGCAAAAGTG AAAAACATCG TTCAGACGCT CGATCTGAGT AATACAAATC TGACACTTCC CGCCAATACC CGGGTGACGC TCACCAAAAC GTTTACCTTC AGCAAGCCCC GGAAGGTGCT TACCCTCACG TCGCATATGC ACAAGCTGGG TGAGAAGTTT GTGATCAAAA TCGTGGGTGG AGCCCGCAAC GGTGAAATCG TTTATACCTC TACCGACTGG GAAAACCCTG AAATTATCAC CTTCAAAACC CCCATCGACC TGCAAAAAGG GGAAGGGCTC ATGTCTGAAA TAACCTATAA TAATACCACC AGCAAAGCCG TCAGCTTCGG CTTGACGAGT GAAGATGAAA TGGGTATTAT TTTCGGGTAT TATTACGAGG AATAG
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Protein sequence | MNFLTYSRLA LTVGLSALFL HMVSCSKDTT ESLTTTETSS FDLIQQKILT PSCATSGCHL SDKDATYFQH GLVLAEGVAY QNLVGVDPKN SSAKADGFKR VKAYASLESL LYHKITTTAG HHSGKQYGNP MPLGGVALSD GQVEFVRRWI DAGAPKTGTI ADATLLNDKT VSEAAYEPLT VPAAGTGFQM AVPSFDIQPN FERELFTRKM LGNTQDVYVN RYETKMRSGS HHFVAYDFRN KALLPNLNDI RDLRNPDNSL NILTALTMSN HVYLAGSQAQ YQDYVFPEGA ALLIPAGASF DLNSHFVNKT TGVRKGEAQI NLYTVDKAKV KNIVQTLDLS NTNLTLPANT RVTLTKTFTF SKPRKVLTLT SHMHKLGEKF VIKIVGGARN GEIVYTSTDW ENPEIITFKT PIDLQKGEGL MSEITYNNTT SKAVSFGLTS EDEMGIIFGY YYEE
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