Gene Slin_0240 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSlin_0240 
Symbol 
ID8723968 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSpirosoma linguale DSM 74 
KingdomBacteria 
Replicon accessionNC_013730 
Strand
Start bp318650 
End bp319672 
Gene Length1023 bp 
Protein Length340 aa 
Translation table11 
GC content52% 
IMG OID 
ProductRadical SAM domain protein 
Protein accessionYP_003385104 
Protein GI284035174 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value0.548206 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones21 
Fosmid unclonability p-value0.016979 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAATCGCA ATGTACTCGA CGGCCTTAAT TTTGCATCCA AGCTAACACC CAAACGCATT 
GTCAATGCGC TGAAAGTAGT GTATAGTTAC TATGAATCAC GGCGAACGGG TAAGGCGATG
CAGCGCGGCT TGCCCATGTC TGTCTCCTTT GAACCCACTA CTTCCTGTAA TCTCCGTTGC
CCCGAATGCC CTAGCGGCCT TCGGTCGTTC ACCCGGCCAA CCGGTATGCT GGGCGAAGAC
CTGTACAAAC GGACCATCGA CGAACTGCAT GACACCCTTT TGTACCTGAT CTTTTACTTT
CAGGGGGAGC CTTACCTGCA CCCGCAATTT CTGGAACTGG TTCGCTACGC TACGGACCGA
AACATATACA CCGCCACCAG TACCAACGCC CACTACCTGA CCGATGCCAA CGCCCGAAAA
ACGGTAGAGT CGGGACTGGA TCGATTAATC ATTTCCATTG ACGGTACCAC GCAGGAAGTG
TACGAACAGT ATCGGGTAGG GGGAAAGCTC GAAAAAGTGC TGGAAGGCAC AAAGAATATT
ATTCGCTGGA AAAAAGAATT GAAATCACGG ACGCCCCATA TCGTCTTTCA GTTTCTGGTC
GTGAAACCCA ACGAACACCA GATTGCCGAG GTAAAGAAAT TAGCCCGCGA ACTGGGTGTC
GATGAAGTGG GATTGAAAAC GGCTCAGATT TACGATTACG AACACGGCTC CGGCCTGATG
CCAACCATAG ATCAGTACAG CCGCTACGCT CCCCAGGCAG ATGGGACTTA CCGCATCAAA
AACGGATTCG GTGACCACTG CTGGAAAATG TGGCATTCAT GCGTCATCAC CTGGGATGGC
CTGGTCGTAC CCTGCTGTTT CGACAAAGAT GCGCATCACC GGCTGGGCGA CCTACAAAGC
CAATCCTTCG CCGATCTCTG GCAAGGCCCT TCCTATACCG ACTTCCGGCA AACCCTGCTC
CGTTCCCGTT CCGAAATAGA GATGTGCCGC AACTGCACCG AAGGCACTAA GGTATGGGCA
TGA
 
Protein sequence
MNRNVLDGLN FASKLTPKRI VNALKVVYSY YESRRTGKAM QRGLPMSVSF EPTTSCNLRC 
PECPSGLRSF TRPTGMLGED LYKRTIDELH DTLLYLIFYF QGEPYLHPQF LELVRYATDR
NIYTATSTNA HYLTDANARK TVESGLDRLI ISIDGTTQEV YEQYRVGGKL EKVLEGTKNI
IRWKKELKSR TPHIVFQFLV VKPNEHQIAE VKKLARELGV DEVGLKTAQI YDYEHGSGLM
PTIDQYSRYA PQADGTYRIK NGFGDHCWKM WHSCVITWDG LVVPCCFDKD AHHRLGDLQS
QSFADLWQGP SYTDFRQTLL RSRSEIEMCR NCTEGTKVWA