Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Slin_0230 |
Symbol | |
ID | 8723958 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Spirosoma linguale DSM 74 |
Kingdom | Bacteria |
Replicon accession | NC_013730 |
Strand | - |
Start bp | 306219 |
End bp | 309128 |
Gene Length | 2910 bp |
Protein Length | 969 aa |
Translation table | 11 |
GC content | 60% |
IMG OID | |
Product | hypothetical protein |
Protein accession | YP_003385094 |
Protein GI | 284035164 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 14 |
Plasmid unclonability p-value | 0.703793 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 22 |
Fosmid unclonability p-value | 0.0560444 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAAACGGC AGGAATCTAT GCGGTCTATC TATTTACTCA GCGTTACACT TCTCTTCTTT TGTATTCTTA TCAGGCCTGT CACCAGTCAG GCTTCTCACG TACGGGCGGG TGAAATTACC ACCAAACGCA TTTCCCGAAC TGCGTTAACC TACGAGATCA CGTTTACGGC CTACTTCGAC GAAACTCCCG GCGGTAAGCT AGCCGCCGAT GCAGCAAACA GCTATACCCT CTGCTTCGGT GATGGTACAA CGGCGGTAGT CGAACGTAGC CAGCGAACTT TTATCAACCG GAATACCTCA TCCATCAATA TATACAAAGC GGTCCATACA TACCCCGGCC CCGGCACCTA TACCATCGGA ATAACGGTTG TCAACCGAAA CAACAATACG CTCAACCTGC CACCGGCCGG TCAATCGGCT CAACTTCCCT TTTTCGTATC CACAACGATC AGCATCAACG CAGCCCTCTT AGCCAATTCA ACCCCGGTGA TGCTCAATCC ACCGCTCGAC TCGGGCCGGG TGGGTCAGAA GTTCTGCCAT AACCCGGCGG CCTTCGATGC CGATGGTGAT AGTCTGGCTT ATCGGCTGAG TATACCCAAA ACATCACCGA CCGAAAATAG CTGTACTGGT CGGAATATCC CCTCGTATCA GAACCCAACC CAATTCAGTA CCGCCACTGA AAATGGTGGC ACACCAACGT TTAGTATCAA CCCGATCACC GGCGAACTTT GCTGGGATTC GCCAGGCCAG GCAGGTCAGT TCAACTTTGC GTTCATCATT GAAGAATGGC GCAACGGGGT GCTCATCGGG GAGATTACCC GTGACATGCA GATATTCATC GTGGACAGCC CCAATAAACG GCCAATCATC CAGCCGATAC CGGACCTGTG CGTGGAAGCC GGTGCCCTCA TCACCCAACC CGTCACCGCC ACCGACCCCG ACGGACAACG CGTCATCATC GCCGGATTCG GGGGCGTCTT CAACATCGGC GCCGACCGGC TACCCCTGCC CGCCAGCGAA CTCATACCTC CCGCCTACGC CCGACTCATC AACGGCGACA TCGCCCAGAA CCAGCCCGCC ACGGCCACCT TCTCCTGGCA GACCAGTTGC AACCAGATTC GGCAGGCCCC CTACGATGTC ACCTTCAAGG TCACCGATGT GCCCCAGCGA CCCACCCCGG CGCTGGTCTC CTTCCAGACC TTCCGCATCC AGATTGTAGG GCCATCCATC AAGAACCTCA CCGCCCGACC CACCGCCACG GCCAACGGTC GAGCCATCCA GCTCTCCTGG AGCCCATACT CCTGTGGTAA TCCCGGCACT TATATTGCTA TCTACCGCAA GGAAGGTTGC GATGACCGGC CCGTGCCTCC CTGTACCACC GGCGTACCAC CCGGCTATAC CAAAATCGCG CAGGTGCCCG TTACGGCTAC CACTTACACA GATACATCTT CTCTGCGCCG GGGCATCTCG TATGCTTACC GGCTGGTGGC GGTATACCCC GACGTCAATG GGGGCAGTAA TGGGGGCGTT TCATTGGCCT CAAACCAGGC CTGCCTCAAC TTACCTTTAC TGGCCCCGGT GATTACCCAG GTGACCGTCG ACTCCACCCG GGACATCAAC GGACAGATCA CCCTCAAGTG GACCAGACCC ATCGGACTCA ACCCCGGCGA CCTGGGCGCA CCCTACCAGT ACCGACTCCA GCGGGCCACC GGCCTGACGG GCACCACATT CACCCCCATC GCCACCATCA ATACCACCCT CAGCCCAACC GCCAACGACA CCACCTTCCT CGACCGGGGC ACCACGGCCA GCCCCCTCAA CACCACGGCT AACCCCTACC GATACCGCAT CGAGTTCTTC TACACCGATG CCACCACCCA ACAGCTCACC CGGCTCGACG TCACCGAAGC GGCCTCCTCC GTCCGACTCA CCGCCACCCC CGCCAACCGA CAGATCACCC TGGCCTGGCA GGCCAGCGTG CCCTGGTCCA ACGACGCCCG TGTCCACGAT GTGTATCGCA GCCGAACTGG CCCCAACGGA CCCTTCAACA AGATCCGCGA AGTCACCGTC CAGGCCCAGC CTTACTCCTT CACCGACGAC GGCTCCGATG CCTTCACCGC CGATGGCAAC ACCAGCCGCG CCCTGTCGGC CGACTCCAGC TACTGCTACC GGGTGATGAC CCGGGGCCAG TACACCGACT CCCAGCTGAG CCGACTGGGC CTGCTGCTCA ACTACAGCCA GGTCATCTGT GCCACCCCCA CCGATACCAC AAGGCCCTGC CCGCCTACCC TCAGCCTGGA CTCGCTCAAC TGTGCCAGCC TTACTTCCGA GAGCTTCTGC AACCAGACCA GCTTCACCAA CCAGCTCCGC TGGACACCGG GCAGCGGGCC CACCTGCGAT GCCAACATTG CCACCTACAA GATCTACTAC GCCCGCTACC GGCCCGACAG TTTGCAGGCC CTGACCAGCG TAGCGGCTCC CACCACCAGC TTTGCCCACA GCAGCCTGAC GACCGTGGCG GGCTGTTACT ATGTGACGGC CGTCAGCGCA CGGGGGCTGG AGAGCCGCCC CTCGAATGTG GTCTGCAACG AGGCCTGTCC TTCGCTGGCA CTGCCCAACG TGTTCACCCC CAACGGGGAC GGCAAGAACG ATGTGTTTGT GCCCCTGGCG TGTCCCCGGT TTGTGGAGCG GATCGAGTTT GTGGTCTACA ACCGGTGGGG AGCCAAGCTC TACGAGGGCA GCGGTCCGAC CCTAAGCTGG GATGGGCGGA GCAGTGACGG GGCGGAGCTG CCCACGGGTC TGTACTACTA TCAGGCCACG GTGCACTATG CCCTGCTCAA CCGCAATGCG CCCCCTCAGA TCCTCAAAAG CTGGGTCCAG ATTATCCGGG AAGGTAGTAG TTTAAAGTAA
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Protein sequence | MKRQESMRSI YLLSVTLLFF CILIRPVTSQ ASHVRAGEIT TKRISRTALT YEITFTAYFD ETPGGKLAAD AANSYTLCFG DGTTAVVERS QRTFINRNTS SINIYKAVHT YPGPGTYTIG ITVVNRNNNT LNLPPAGQSA QLPFFVSTTI SINAALLANS TPVMLNPPLD SGRVGQKFCH NPAAFDADGD SLAYRLSIPK TSPTENSCTG RNIPSYQNPT QFSTATENGG TPTFSINPIT GELCWDSPGQ AGQFNFAFII EEWRNGVLIG EITRDMQIFI VDSPNKRPII QPIPDLCVEA GALITQPVTA TDPDGQRVII AGFGGVFNIG ADRLPLPASE LIPPAYARLI NGDIAQNQPA TATFSWQTSC NQIRQAPYDV TFKVTDVPQR PTPALVSFQT FRIQIVGPSI KNLTARPTAT ANGRAIQLSW SPYSCGNPGT YIAIYRKEGC DDRPVPPCTT GVPPGYTKIA QVPVTATTYT DTSSLRRGIS YAYRLVAVYP DVNGGSNGGV SLASNQACLN LPLLAPVITQ VTVDSTRDIN GQITLKWTRP IGLNPGDLGA PYQYRLQRAT GLTGTTFTPI ATINTTLSPT ANDTTFLDRG TTASPLNTTA NPYRYRIEFF YTDATTQQLT RLDVTEAASS VRLTATPANR QITLAWQASV PWSNDARVHD VYRSRTGPNG PFNKIREVTV QAQPYSFTDD GSDAFTADGN TSRALSADSS YCYRVMTRGQ YTDSQLSRLG LLLNYSQVIC ATPTDTTRPC PPTLSLDSLN CASLTSESFC NQTSFTNQLR WTPGSGPTCD ANIATYKIYY ARYRPDSLQA LTSVAAPTTS FAHSSLTTVA GCYYVTAVSA RGLESRPSNV VCNEACPSLA LPNVFTPNGD GKNDVFVPLA CPRFVERIEF VVYNRWGAKL YEGSGPTLSW DGRSSDGAEL PTGLYYYQAT VHYALLNRNA PPQILKSWVQ IIREGSSLK
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