Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Slin_0229 |
Symbol | |
ID | 8723957 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Spirosoma linguale DSM 74 |
Kingdom | Bacteria |
Replicon accession | NC_013730 |
Strand | - |
Start bp | 303138 |
End bp | 306029 |
Gene Length | 2892 bp |
Protein Length | 963 aa |
Translation table | 11 |
GC content | 61% |
IMG OID | |
Product | hypothetical protein |
Protein accession | YP_003385093 |
Protein GI | 284035163 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 15 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 28 |
Fosmid unclonability p-value | 0.449172 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCGGTTCC TCTATATACT TGGTTTTTTA GGTCTGTTTT TCTGCGCTGT TCTGAAGCCT ACGGCCAGTC GGGCAACTCA CGTACGGGCG GGTGAAATCA CCACCAAACG AATTTCGCAA ACGTCCCTTA CCTACAGAAT AACCTTCACC GCTTACTTCG ACGAAGTAAA AGGAAAACCA GCCGCTGACC AGGCTGAAAA TTATACATTT TGCTTTGGCG ATGGCACAAC GGCCGATGTA CGCCGAAGCA GCCGGGTATA TATTAACGGA CGCACCTCAT CGGTAAACAG TTACACCGTT GTCCATACGT ATCCTGGGCC AGGAACCTAT ACCATTGGCG TAACCGTACC CAACCGAAAT GCCGATACCA AAAACCTTCC CCCGGCGGCC ACATCTGATC AGATTCGTTT CTTTGTCTCA ACGACGATTT ACATCAATGC GGCTCTGCTG ACCAACTCCA CCCCGGTGAT GCTCAACCCA CCGCTCGACT CGGGCCGGGT GGGTCAGAAG TTCTGCCATA ACCCAGCGGC ATTCGATGCC GATGGTGATA GCCTCGCTTA CCGATTGAGT GTGCCTCAAA CAAGTTTAAC CGATAACGGA TGTGTAGGGC GAGCAATTCC GTCCTATCAG GACCCCACCC GGTTCAGTAC CGTCCGGGAG GGCGGAGGCA CACCCCCTAC CTTCTCTATC GATGCCCGTA CCGGCGAACT CTGCTGGGAC GCACCGGGTG AAATCGGTCA GTTCAACTTT GCGTTCATCA TTGAAGAATG GCGCAACGGC GTGCTCATCG GGGAGATCAC CCGCGATATG CAGATTATTG TCGTCGACAA TAGAAATTTA CGGCCAATCA TCCAGCCGAT ACCAGACTTG TGCGTGGAAG CCGGTGCCCT CATCACCCAA CCCGTCACCG CCACCGACCC CGACGGACAA CGCGTCATCA TCGCCGGATT CGGGGGCGTC TTCAACATCG GCGCCGACCG GCTACCCCTG CCCGCCAGCG AACTCATACC TCCCGCCTAC GCCCGACTCA TCAACGGCGA CATCGCCCAG AACCAGCCCG CCACGGCCAC CTTCTCCTGG CAGACCAGTT GCAACCAGAT TCGGCAGGCC CCCTACGATG TCACCTTCAA GGTCACCGAT GTGCCCCAGC GGCCCACCCC GGCGCTGGTC TCCTTCCAGA CCTTCCGCAT CCAAATCGTG GGCCCTTCCA TCAAGAACCT CACCGCCCGG CCCACCGCCA CGGCCAACGG TCGAGCCATC CAGCTCTCCT GGAGCCCATA CTCCTGTGGT AATCCCGGCA CTTATATTGC TATCTACCGC AAGGAAGGTT GCGATGACCG GCCCGTGCCT CCCTGTACCA CCGGCGTACC ACCCGGCTAT ACCAAAATCG CGCAGGTGCC CGTTACGGCT ACCACTTACA CAGATACATC TTCTCTGCGC CGGGGCATCT CGTATGCTTA CCGGCTGGTG GCGGTATACC CCGACGTCAA CGGGGGCAGC AACGGGGGCG TCTCGCTAGC CTCCAACCAG GCCTGCCTGA ACTTGCCCCT GCTCTCGCCG GTCATCACCC AGGTCACCGT CGACTCCACC CGGGACATCA ACGGACAGAT CACCCTCAAG TGGACCAGAC CCATCGGACT CAACCCCGGC GACCTGGGCG CACCCTACCA GTACCGACTC CAGCGGGCCA CCGGCCTGAC GGGCACCACA TTCACCCCCA TCGCCACCAT CAATACCACC CTCAGCCCAA CCGCCAACGA CACCACCTTC CTCGACCGGG GCACCACGGC CAGCCCCCTC AACACCACGG CTAACCCCTA CCGATACCGC ATCGAGTTCT TCTACACCGA TGCCACCACC CAACAGCTCA CCCGGCTCGA CGTCACCGAA GCGGCCTCCT CCGTCCGACT CACCGCCACC CCCGCCAACC GACAGATCAC CCTGGCCTGG CAGGCCAGCG TGCCCTGGTC CAACGACGCC CGTGTCCACG ATGTGTATCG CAGCCGAACT GGCCCCAACG GACCCTTCAA CAAGATCCGC GAAGTCACCG TCCAGGCCCA GCCTTACTCC TTCACCGACG ACGGCTCCGA TGCCTTCACC GCCGATGGCA ACACCAGCCG CGCCCTGTCG GCCGACTCCA GCTACTGCTA CCGGGTGATG ACCCGGGGCC AGTACACCGA CTCCCAGCTG AGCCGACTGG GCCTGCTGCT CAACTACAGC CAGGTCATCT GTGCCACCCC CACCGATACC ACAAGGCCCT GCCCGCCTAC CCTCAGCCTG GACTCGCTCA ACTGTGCCAG CCTTACTTCC GAGAGCTTCT GCAACCAGAC CAGCTTCACC AACCAGCTCC GCTGGACACC GGGCAGCGGG CCCACCTGCG ATGCCAACAT TGCCACCTAC AAGATCTACT ACGCCCGCTA CCGGCCCGAC AGTTTGCAGG CCCTGACCAG CGTAGCGGCT CCCACCACCA GCTTTGCCCA CAGCAGCCTG ACGACCGTGG CGGGCTGTTA CTATGTGACG GCCGTCAGCG CACGGGGGCT GGAGAGCCGC CCCTCGAATG TGGTCTGCAA CGAGGCCTGT CCTTCGCTGG CACTGCCCAA CGTGTTCACC CCCAACGGGG ACGGCAAGAA CGATGTGTTT GTGCCCCTGG CGTGTCCCCG GTTTGTGGAG CGGATCGAGT TTGTGGTCTA CAACCGGTGG GGAGCCAAGC TCTACGAGGG CAGCGGTCCG ACCCTAAGCT GGGATGGGCG GAGCAGTGAC GGGGCGGAGC TGCCCACGGG TCTGTACTAC TATCAGGCCA CGGTGCACTA TGCCCTGCTC AACCGCAATG CGCCCCCTCA GATCCTCAAA AGCTGGGTCC AGATTATCCG GGAAGGTAGT GGATCGAGAT AG
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Protein sequence | MRFLYILGFL GLFFCAVLKP TASRATHVRA GEITTKRISQ TSLTYRITFT AYFDEVKGKP AADQAENYTF CFGDGTTADV RRSSRVYING RTSSVNSYTV VHTYPGPGTY TIGVTVPNRN ADTKNLPPAA TSDQIRFFVS TTIYINAALL TNSTPVMLNP PLDSGRVGQK FCHNPAAFDA DGDSLAYRLS VPQTSLTDNG CVGRAIPSYQ DPTRFSTVRE GGGTPPTFSI DARTGELCWD APGEIGQFNF AFIIEEWRNG VLIGEITRDM QIIVVDNRNL RPIIQPIPDL CVEAGALITQ PVTATDPDGQ RVIIAGFGGV FNIGADRLPL PASELIPPAY ARLINGDIAQ NQPATATFSW QTSCNQIRQA PYDVTFKVTD VPQRPTPALV SFQTFRIQIV GPSIKNLTAR PTATANGRAI QLSWSPYSCG NPGTYIAIYR KEGCDDRPVP PCTTGVPPGY TKIAQVPVTA TTYTDTSSLR RGISYAYRLV AVYPDVNGGS NGGVSLASNQ ACLNLPLLSP VITQVTVDST RDINGQITLK WTRPIGLNPG DLGAPYQYRL QRATGLTGTT FTPIATINTT LSPTANDTTF LDRGTTASPL NTTANPYRYR IEFFYTDATT QQLTRLDVTE AASSVRLTAT PANRQITLAW QASVPWSNDA RVHDVYRSRT GPNGPFNKIR EVTVQAQPYS FTDDGSDAFT ADGNTSRALS ADSSYCYRVM TRGQYTDSQL SRLGLLLNYS QVICATPTDT TRPCPPTLSL DSLNCASLTS ESFCNQTSFT NQLRWTPGSG PTCDANIATY KIYYARYRPD SLQALTSVAA PTTSFAHSSL TTVAGCYYVT AVSARGLESR PSNVVCNEAC PSLALPNVFT PNGDGKNDVF VPLACPRFVE RIEFVVYNRW GAKLYEGSGP TLSWDGRSSD GAELPTGLYY YQATVHYALL NRNAPPQILK SWVQIIREGS GSR
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