| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Slin_0227 |
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| Symbol | |
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| ID | 8723955 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Spirosoma linguale DSM 74 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013730 |
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| Strand | + |
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| Start bp | 301046 |
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| End bp | 302320 |
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| Gene Length | 1275 bp |
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| Protein Length | 424 aa |
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| Translation table | 11 |
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| GC content | 49% |
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| IMG OID | |
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| Product | diaminopimelate decarboxylase |
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| Protein accession | YP_003385091 |
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| Protein GI | 284035161 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 19 |
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| Plasmid unclonability p-value | 0.690316 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 31 |
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| Fosmid unclonability p-value | 0.715181 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGCAACTAA ATAACCGTAC TTACCAGATT CAGGGTGTCG ATGTACTGGA GATAGCCGAC
CAATTCGGCC TTCCGTTATA CGTCTATGAC GCCGACAAAA TTATCGAAAA AATCGGCTTG
CTCCGGTCTT CATTTGCCGG TGTCAACCTA AAGATAAAAT ACGCGGCCAA GGCGCTGACA
AATATCTCCA TCCTGAAGCT GATGCGGCAG CAGGGCGTGG AAATGGATTC GGTATCGGTC
AATGAAGCCC GCATGGGCAT GATGGCTGGT TTTGAGCCAG GCCAGATTAT GTTTACGCCA
AGCGGTGTAT CGTTCGAGGA AATCCGCGAA GCCGTTTCGC TTGGGTTACA GTTAAACGTC
GATAGCCTGC CATTATTGGA ATGGGTTGGC CAAACATACG GAACGCAGGT GCCCATCAGC
ATCCGGATTA ACCCCCACAT CAGCGAAGGC GGGAACATCA AGATTTCGAC TGGTCATGCC
GACTCAAAGT TTGGTATTTC CATTCTGCAA CGCGACCAAA TTCGTGCCGT GGTGGAGCAG
TACCAGATTC CGGTAGCTGG ATTGCACATT CATACGGGTT CTGATTTTAA AAATGCCGGT
GCATTTTTGA AAGGTGCCGA GGTCCTGTTC GATCTCGCCA GCGATTACCC GAACCTGTCG
TTCATTGATT TCGGCAGTGG CTTCAAAGTG GCGTACAAAG AAGGTGACCA TATTACGGAT
GTTGAAGAAC TTGGTCATCA AGTGTCGGCT GCTTTCCAGA ACTTCTGTAA GAACTACGGT
CGTGACCTCG AACTCTGGTT CGAACCGGGT AAGTTTTTGG TGAGCGAAAG TGGCCATCTG
TTGGTAAAAA CCAACATCGT GAAGGAAAAC CCGACACGTA CGTTCGTAGC CGTCGATTCG
GGGCTGAACC ACCTCATTCG CCCGATGATG TACGACGCGT ATCACGACAT CAAAAACATC
TCGAATCCAT CCATTCCGGG TGAGGATACA GCAGAAAAAA CCTATAATGT CGTGGGCTAT
ATCTGCGAAA CGGACACGTT CGCAACAGAC CGTGCTTTGC CGGAAGTAAA ACCCGGCGAC
GTGTTGTCTT TTGAGAATGC TGGTGCCTAT GGTTTTAGCA TGGCCTCCAA TTACAACGCC
CGTTTCCGAC CCGCCGAAGT GCTGGTTTAC GAAGGAACAC CGTACCTGAT CCGTCAGCGT
GAAACGTTCG AGGATCTGGT TCGCGGTCAG GTAGATTTGT CAATTTTTAA TCAACAGGAA
ATACTAAATG CGTAA
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| Protein sequence | MQLNNRTYQI QGVDVLEIAD QFGLPLYVYD ADKIIEKIGL LRSSFAGVNL KIKYAAKALT
NISILKLMRQ QGVEMDSVSV NEARMGMMAG FEPGQIMFTP SGVSFEEIRE AVSLGLQLNV
DSLPLLEWVG QTYGTQVPIS IRINPHISEG GNIKISTGHA DSKFGISILQ RDQIRAVVEQ
YQIPVAGLHI HTGSDFKNAG AFLKGAEVLF DLASDYPNLS FIDFGSGFKV AYKEGDHITD
VEELGHQVSA AFQNFCKNYG RDLELWFEPG KFLVSESGHL LVKTNIVKEN PTRTFVAVDS
GLNHLIRPMM YDAYHDIKNI SNPSIPGEDT AEKTYNVVGY ICETDTFATD RALPEVKPGD
VLSFENAGAY GFSMASNYNA RFRPAEVLVY EGTPYLIRQR ETFEDLVRGQ VDLSIFNQQE
ILNA
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