Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Slin_0221 |
Symbol | |
ID | 8723949 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Spirosoma linguale DSM 74 |
Kingdom | Bacteria |
Replicon accession | NC_013730 |
Strand | - |
Start bp | 293414 |
End bp | 294868 |
Gene Length | 1455 bp |
Protein Length | 484 aa |
Translation table | 11 |
GC content | 48% |
IMG OID | |
Product | protein of unknown function DUF306 Meta and HslJ |
Protein accession | YP_003385085 |
Protein GI | 284035155 |
COG category | |
COG ID | |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 12 |
Plasmid unclonability p-value | 0.057348 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 32 |
Fosmid unclonability p-value | 0.928248 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGAAACAAA TCATTACCAC CCTTATCTGT CTGGCGTTAC CCTGTCTGGT ATTTGGGCAG TCTCTGAAAA CCGGTTTCGA CAAAGCCGAA TACATCGAAC TCCTCAAAGT ATCGGCCCAA TTTGGCGATT CCACTTACGT CAGTTCGTTT CCGGCTCCGC AGCAGTACAA ACTGGCTTAC CGCTCACCCG TAGTCGGGCT GGACAATCGG TGGGATTTAT GGACCAGCCA GCAAGCCGTA GCCGTGCTTA GTATTCGTGG TACAACGGCA AATAGTGTAA GCTGGCTCAG TAATTTTTAT GCAGCCATGG TGCCCGCTAA AGGATCAATA CAAATCAGTG ACAAAGAAAA CTTCCAGTAT GAACTGGCGT CCAGCCCAAA GGCAGCTGTA CATGTAGGCT GGCTGTTAGG TACGGCTTTT CTGGCGAAGG ACATCCTGCC AAAAATTGAT TCGTGCTACC GGGCAGGCAT CAAAGACATG CTTATCATGG GCCACAGCCA GGGTGGAGGC ATTGCGTTTC TGTTGACAGC CTACTTGAAA AACCTCCAGA AGCAGGGCAA AATACCGGCC GACATTCGGT TCAAAACATA CTGTAGCGCC GGACCCAAAC CCGGCAATCT GTATTTTGCC TATGAGTATG AAGCCGCTAC GCAGAACGGG TGGGCCTATA ACGTTGTCAA TGCCGCAGAC TGGGTGCCGG AAGTACCTTT TTCCATTCAG ACGATCAACG ATGTCAACAC GACCAATCCG TTCAGAGGAG CACCGGCGAT GATAAAGAAA CAGAAGCTCC CGCAACGCAT CGTTCTGAAA TACATCTACA ACAGCCTGAG CAAACCAGCC CTGAAGGCAC AGCAAAACTA TCAGAAATTT TTGGGCAGAC TGGCGTCTAA AACCGTACAG AAAAACCTGA ACGGCTACGT AGCACCGGAC TACTACAATA GCAGTGATTA CGTAAGAACC GGAACAACTA TCGTCTTACT ACCAGATAGC GAATACTTTA AAAAATACCC GGATAGTGAG GAGAAGATTT TTGTCCATCA CTTTCATCCA CCTTATTTAT ACCTGACAGA AAAGCTTTCC ATGTCGCCTG ATCAGATGCA GTCGTCCAGC ACCAATCAAT CCTTAGACGG TACCTGGGAA CTGAACTATA TATCGGGGCC AAGAATGGCG TTCGAAGGGT TGTACCCCGA AAAAAAGCCA TCCATCACTT TCGATACCGC TAACCAACGG CTCAATGGGT CGACCAGTTG TAATTCGTTC AACGGAAAGC TCGTTGTGGA TGGTCCGAAA GTCAATTTCA CCCAGCCAAT GGCCACAACG CGTATGATGT GCCCTGGCGA CGGCGAACAA ACGTTTTTAA ACGTATTAAA AACCGTGAAT CGCTACTCCG TCAGTGACAA CACGCTCACG CTGATTATGG GCGATATTGC GGTAATGCGG TTCATCAGAA AATAG
|
Protein sequence | MKQIITTLIC LALPCLVFGQ SLKTGFDKAE YIELLKVSAQ FGDSTYVSSF PAPQQYKLAY RSPVVGLDNR WDLWTSQQAV AVLSIRGTTA NSVSWLSNFY AAMVPAKGSI QISDKENFQY ELASSPKAAV HVGWLLGTAF LAKDILPKID SCYRAGIKDM LIMGHSQGGG IAFLLTAYLK NLQKQGKIPA DIRFKTYCSA GPKPGNLYFA YEYEAATQNG WAYNVVNAAD WVPEVPFSIQ TINDVNTTNP FRGAPAMIKK QKLPQRIVLK YIYNSLSKPA LKAQQNYQKF LGRLASKTVQ KNLNGYVAPD YYNSSDYVRT GTTIVLLPDS EYFKKYPDSE EKIFVHHFHP PYLYLTEKLS MSPDQMQSSS TNQSLDGTWE LNYISGPRMA FEGLYPEKKP SITFDTANQR LNGSTSCNSF NGKLVVDGPK VNFTQPMATT RMMCPGDGEQ TFLNVLKTVN RYSVSDNTLT LIMGDIAVMR FIRK
|
| |