Gene Slin_0217 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSlin_0217 
Symbol 
ID8723945 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSpirosoma linguale DSM 74 
KingdomBacteria 
Replicon accessionNC_013730 
Strand
Start bp289522 
End bp290835 
Gene Length1314 bp 
Protein Length437 aa 
Translation table11 
GC content55% 
IMG OID 
ProductO-acetylhomoserine/O-acetylserine sulfhydrylase 
Protein accessionYP_003385081 
Protein GI284035151 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones21 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones33 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTCAGAAC TTCACTTTGA TACCCTCCAG CTGCACGCTG GTCAGGAGGT CGACCCTACT 
ACCAATGCAC GGGCCGTACC CATTTATCAA ACAACATCAT TTGTATTCAA TGATTCGGCT
CACGGGGCCG ATCTGTTTGC GCTGAAAGCG TTTGGGAACA TCTATACCCG CATCATGAAC
CCAACGTCCG ATGTGTTCGA AAAGCGCGTT GCGGCTCTCG AAGGTGGTGT GGCAGCGCTG
GCGGTGGCTT CCGGACAGGC GGCCCAGTTC ATCGCGCTGA GCAATATCCT GAGCGCGGGC
GATAATTTTG TGACGACGTC GTTCCTCTAC GGTGGCACCT ACAACCAGTT TAAAGTGTCG
TTCAAGCGGC TGGGTATCGA AGCCCGCTTT GCCGACGGCG ACAAGCCCGA GTCGTTTGCC
AAACTGATCG ACGAAAATAC CAAAGCGATC TACCTCGAAA CGATTGGCAA TCCAGGGTTC
AATATTCCCG ATTTTGATGC CTTTGCCGCA CTGGCAAAGG AGTACGATCT ACCCCTGATC
GTCGATAATA CATTTGGTGC CGGTGGCTAC CTCTTCCGCC CGCTCGAACA CGGTGCTGCC
GTGGTCGTGG AGTCGGCTAC GAAGTGGATT GGCGGACATG GTACGAGCAT CGGCGGGGTT
ATTGTCGATG GAGGTACGTA CAACTGGGGA AATGGTAAGT TTCCGCAATT CAGCGAACCA
TCGGAAGGGT ATCACGGCAT GGTATTTAGC GATGTGTTCG GGGTGGGTGG TCCCTTCGGC
AACATCCAGT TCATTATTCG TGCCCGCGTA GAAGGCCTGC GCGATTGGGG CCCGGCCATC
AGTCCGTTCA ACTCATTCCT GCTGCTGCAG GGGCTGGAAA CGCTCTCGTT GCGCGTGGAT
CGTACGGTGC AGAACGCCCT GGCGCTGGCC CAATGGCTGG AGCAGCACGA ACAGGTGGAA
GCCGTAAACT ATCCGGGTCT GGAGAGCAGC CCGTACCATG AACTGGCCAA GAAATACCTT
AAACGCGGGT TCGGGGGCGT ATTCTCCTTT AAAGTGAAAG GGGGTAATGA AGCCGCCAAT
GAGTTTGTCA ACAGCCTGAA ACTGGTGAGT CACCTTGCCA ACGTTGGCGA CTCCAAAACG
TTGATTATTC ACCCGGCGGC TACTACACAC CAGCAATTAA GCGAACAGGA GCAGGCTAGT
GCGGGTGTTG AAGTAGGGGT GCTGCGGGTT TCGGCCGGTA TCGAACACAT TGATGATATT
AAAGCTGACT TCGAGCAGGC CTTCGCCAGG ATTGCCGAAC CAGTAATAGG ATAG
 
Protein sequence
MSELHFDTLQ LHAGQEVDPT TNARAVPIYQ TTSFVFNDSA HGADLFALKA FGNIYTRIMN 
PTSDVFEKRV AALEGGVAAL AVASGQAAQF IALSNILSAG DNFVTTSFLY GGTYNQFKVS
FKRLGIEARF ADGDKPESFA KLIDENTKAI YLETIGNPGF NIPDFDAFAA LAKEYDLPLI
VDNTFGAGGY LFRPLEHGAA VVVESATKWI GGHGTSIGGV IVDGGTYNWG NGKFPQFSEP
SEGYHGMVFS DVFGVGGPFG NIQFIIRARV EGLRDWGPAI SPFNSFLLLQ GLETLSLRVD
RTVQNALALA QWLEQHEQVE AVNYPGLESS PYHELAKKYL KRGFGGVFSF KVKGGNEAAN
EFVNSLKLVS HLANVGDSKT LIIHPAATTH QQLSEQEQAS AGVEVGVLRV SAGIEHIDDI
KADFEQAFAR IAEPVIG