Gene Slin_0193 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSlin_0193 
Symbol 
ID8723921 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSpirosoma linguale DSM 74 
KingdomBacteria 
Replicon accessionNC_013730 
Strand
Start bp259060 
End bp259989 
Gene Length930 bp 
Protein Length309 aa 
Translation table11 
GC content52% 
IMG OID 
Producthypothetical protein 
Protein accessionYP_003385057 
Protein GI284035127 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones22 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones37 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCAATCAC AAGCTACTTC ACGCATTCTG ATGATCCGAC CGGTAAACTT CGGGTTCAAT 
ACCGAAACTG CCGAATCAAA TGCGTTTCAG AATAGTCAGC TGGCCGCGCA AACGAAGGAT
ACAGCCCAGG AAACCGCCCA GCGAGAGTTC GACGAGATGG CGCGTCAGCT TCGGGCTATG
GGGGTCGATG TTATAGTTTA CGACGACACA ACGGAGCCCT ACACACCCGA TTCTATCTTT
CCGAACAACT GGATTTCCTT TCACGCCAGC GGAACGGTGG TCCTGTATCC CATGCAGGCC
GAAAACCGTC GTCTCGAACG TCGGCAGGAT ATTGTTGACG ACCTGCGCAA AAATTATCAC
GTAGCCAAGG TCGTTGACCT GACTCATTTC GAGCAGGAGG GAAAGTTTCT GGAGGGGACT
GGCAGTATGA TCCTCGACCG GATGAATAAA GTTGCTTTTG CCAGTCTGTC GCCCCGCACG
CATCCCGATG TGCTGGCGGA GTTTAGTCGG CAGACAAACT ACCGTGTTGT GTCGTTTCAT
TCGGCCGATG CCAATGGGCA AGCTATTTAT CATACCAATG TGCTCATGTG CATTGCCGAT
ACGTTTGCTG TCGTTTGTCT ATCGGCAATT ACCGATCCTG ATGAGCGCCT GATGGTGCGC
CAGGAGTTGG AGAAGCTGAA TAAGCGGGTC ATTGACATAT CGCTGGAACA GATGGCCAAT
TTTGCCGGTA ACATGCTCAT GGTAACGACC AACAAGGGGC AGAAGCTGCT GGTGATGTCC
ACCCGCGCTT TTGAGTCGCT GACACCCAAA CAGATTGATC TGCTCGACGA TTACACAACT
CTGGTTCACT TCGATCTGTC CATGATCGAA AACAACGGTG GCGGCTCCGC CCGTTGCATG
ATGGCGGAAG TACATTTGCC GAGGAAATAA
 
Protein sequence
MQSQATSRIL MIRPVNFGFN TETAESNAFQ NSQLAAQTKD TAQETAQREF DEMARQLRAM 
GVDVIVYDDT TEPYTPDSIF PNNWISFHAS GTVVLYPMQA ENRRLERRQD IVDDLRKNYH
VAKVVDLTHF EQEGKFLEGT GSMILDRMNK VAFASLSPRT HPDVLAEFSR QTNYRVVSFH
SADANGQAIY HTNVLMCIAD TFAVVCLSAI TDPDERLMVR QELEKLNKRV IDISLEQMAN
FAGNMLMVTT NKGQKLLVMS TRAFESLTPK QIDLLDDYTT LVHFDLSMIE NNGGGSARCM
MAEVHLPRK