| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Slin_0182 |
|---|
| Symbol | |
|---|
| ID | 8723910 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Spirosoma linguale DSM 74 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013730 |
|---|
| Strand | - |
|---|
| Start bp | 237960 |
|---|
| End bp | 239903 |
|---|
| Gene Length | 1944 bp |
|---|
| Protein Length | 647 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 59% |
|---|
| IMG OID | |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_003385046 |
|---|
| Protein GI | 284035116 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 19 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 33 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAGTGTTT TTTGTCAAGG TACTCGCACA AAACTCCTCC TTGTGGTTTA CCTTACTTTC
TTTTGGATTG TCAGGGGTTA TGCACAATCG GGCTCGTTCG GAAATACATT TATTGCCACT
AGTGGGGAGA TGGGCATTAT TGGTGTTCAG CATAATTTCC AGCAGGGGAG CGGTGGCGAG
TTACCCGGTA TTGTTAAAAC CGAACGCACA GCTCCGCAGG GGTATCTGAG CTTTTCGGAC
GGTGCCACCT ACCAGTCGGC TACAGACAAT GCCCACGTAG ATGGCTACGT TCGTACGTAC
AACACCTCGG CGTTTACCTT TCCCATAGGC AATGGCACCG TCTACCGGCC GCTGAGCATA
CCGGCACCAG GCTCGCCAAC CAGCTACGAG GCTGCTTATT TCAGTGTCAA TCCATCGATG
GCCACCCTAC CAGCGGGTGC CCCTTTTTCA TCTACCAGTC TAGGAACAGG GGTAGTTGGC
GTTAGTCCGG TGGAGTACTG GGATCTGGAT GGCACCGTTG CCACAACTGT CACCCTGACC
TGGAATGCCG CCAGCAACCT GAACACCCTG GCGGGTGGCG TGCTGGCTAA CTTACGCGTA
GTTGGTTACA ACAGTTCGAC TACCACCTGG GAGAACCTGG GGCAGGCCGC TATAACCGGT
ATGCTGAGCG GTACCGGTAC ACTTACATCG GCGCTTTCGT TTGTGCCTAA TACGTATAGT
GCCCTCACGT TTGGTGTGAT GGCCTCGCCC GATCTGAGCA TCAGCCTTGG CCAGCCCAGC
CCGGTTCTGG TGGCGGGGGT AACCAGTAGC CTGCCCATCT CGGTCAGTAA CATTGGGTCG
GAGGCAACCA CAAACCCAAT TACCGTAACC CTGACGTTTC CCGCCGATCT GACCGTGCCG
ACGACCTTCA CCACGGGCAA TTTTGGGTGC GAGGTAGCGA GTGGCGTAGT CAGTTGTACC
AGTACCACCC CCATTGCCGC TGGGGCCAGT ACCACACTGG CTGTGCCGGT GACCCCAACG
CCAGCCGCCA TAGGCAGTTT CCCAACGTTT ACCGGCGGTA CCAATACGCC AACCGACAGC
AATCCAGCCA ACAACACCGC TACGGTTACG TCGGTTAGTG CCGTGCAACC GGCTACCCTG
GTGGTGTCGG TGAAAGCCTG GCTACAGGGG GCCGGTGCCC AAACCAACAG CCCCACCCTG
GCCAATGCCG ATGGGCTCAT GCGCGATGAC CTCCGGGTGG CCGGTCTGCT GCCCACCACC
GAACCCTATA CCGCCCTGGG CTACTCCGCC GTGGTCGCTA CCAGTATCGC CCCTTCGGTC
ACCGCCACCA CCGGGGCCGA TGCCATTGTA GACTGGATAC TGCTCGAACT GCGCGATGCC
AACCAGCCCA CCACCGTCGT ACGCCGACAA GCGGCTCTGC TCCAGCGGGA TGGCGACATT
GTGGCTACCG ACGGGGTGTC GCCAGTGTCG ATTCTGGCGC CCACGGGCAG CTACTACGTG
GCCGTTCGTC ACCGCAACCA CCTGGGGGCG ATGCTCGAGA CCTCGGTTGG GCTGTCGGGC
ACAGTGACCT CGGTCAACTT CACCAATACG ACAGCGACCT ACGGGGCAAA TGCCCAGACA
TCGGTCGGGG GCAAGTACAG CTTATGGGCG GGCAATGCGA ACGGGGGGCC GGGTACCACC
TCGGGTCAGA ACACATTGAT TGCCCAGGGC CTGGGCAGTG ACCGCAGCAC GGTGACCAAC
CAGGTAACGG GGGCTTCGGG TAACAGCACA GGCGTGAACA CGTTCATTTC GGCGGGCTAC
CAGCAGACGG ATGTGAACAT GGATGGGAAG GCGATTGCCA GCGGCCAGCG TGCCGACAAC
TCGTTCATTC TGAACGTAGT GCTATCGAGT TCCTTAAACA GTGCAGCGGT AAACAGCTTC
ATCATCACCC AGCAGTTGCC GTAA
|
|---|
| Protein sequence | MSVFCQGTRT KLLLVVYLTF FWIVRGYAQS GSFGNTFIAT SGEMGIIGVQ HNFQQGSGGE
LPGIVKTERT APQGYLSFSD GATYQSATDN AHVDGYVRTY NTSAFTFPIG NGTVYRPLSI
PAPGSPTSYE AAYFSVNPSM ATLPAGAPFS STSLGTGVVG VSPVEYWDLD GTVATTVTLT
WNAASNLNTL AGGVLANLRV VGYNSSTTTW ENLGQAAITG MLSGTGTLTS ALSFVPNTYS
ALTFGVMASP DLSISLGQPS PVLVAGVTSS LPISVSNIGS EATTNPITVT LTFPADLTVP
TTFTTGNFGC EVASGVVSCT STTPIAAGAS TTLAVPVTPT PAAIGSFPTF TGGTNTPTDS
NPANNTATVT SVSAVQPATL VVSVKAWLQG AGAQTNSPTL ANADGLMRDD LRVAGLLPTT
EPYTALGYSA VVATSIAPSV TATTGADAIV DWILLELRDA NQPTTVVRRQ AALLQRDGDI
VATDGVSPVS ILAPTGSYYV AVRHRNHLGA MLETSVGLSG TVTSVNFTNT TATYGANAQT
SVGGKYSLWA GNANGGPGTT SGQNTLIAQG LGSDRSTVTN QVTGASGNST GVNTFISAGY
QQTDVNMDGK AIASGQRADN SFILNVVLSS SLNSAAVNSF IITQQLP
|
|---|
| |