Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Slin_0174 |
Symbol | |
ID | 8723902 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Spirosoma linguale DSM 74 |
Kingdom | Bacteria |
Replicon accession | NC_013730 |
Strand | - |
Start bp | 210353 |
End bp | 211678 |
Gene Length | 1326 bp |
Protein Length | 441 aa |
Translation table | 11 |
GC content | 53% |
IMG OID | |
Product | FeS assembly protein SufD |
Protein accession | YP_003385038 |
Protein GI | 284035108 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 21 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 8 |
Fosmid unclonability p-value | 0.0000000908978 |
Fosmid Hitchhiker | Yes |
Fosmid clonability | hitchhiker |
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Sequence |
Gene sequence | ATGACTCCCT CTTACGCATC ATATAACGAT TTTAAGGAGC AGTTGCTGGC GTCTTTTCGG GACAACGAAG AGCGCATGAA CGGCGAACGA AAATCGCCGT TACATCAGCT TCGCCGGGCA GCCCTGAAAC AGTTCGAGCA GTTGGGCTTC CCCACAATTC GGCACGAAGA GTGGAAGTAC TCCAATGTCA ACAGTCTGAT TAAAGAAGAC TTTGCCCTCG ACGCAACGTC TTCCCTAACA GCCGAAGACC TGGCTCCGCT CGAAATCCCG AACCTCGAAG GCAATATTCT GTATTTCGTT AACGGCATCT ATCACCCCGA ACTGTCGCGG CTTGTCAGCC CGTCTGAACA GGTACAGATT ACCAGCCTCG CCGAGGCAAT CAAGGCAGAT CCTGAGTTTG TCGGAACACA TTTCGCCCAT TACGCCGATT ACCAGGACAG TGCGTTTACA GCGCTTAATA CGGCTATGGC CAGCGATGGT GTGGTCGTTC GGGTACCGGC GAATACAACC GTTGAACAGC CGATCATTCT GCGCTTCATT ACCGACGCCC GCGTCAATAA CATCACCTCG CAGCCCCGCA ACCTCATCGT GATTGGCAAA AATGCCGAGG TCATGATGGC GGAATCGTAC CGGACGCTGG GCGAAAAGTC CAGCTTTGTC AACGTCGTAA CGGAAATCGT GCTCGACCGC GATGCCCGGA TGCAGTACTA TAAAGTGCTG AACGAAACTG CGAAAGCGTA TCATATTGGC ACGACGCAGG TTCATCAGTC CGACAATAGC CATTTTTACT CTGCGTCGAT CACGCTCAAC GGCCATTTCG TTCGAAACAA CCTGAATATT GTGCTCAACG GCCAACATGC CGAAGCCTTT ATGTACGGTC TGTACATGCC CAACGGTCGC CAGCACGTAG ATAACCATAC GCTGGTCGAC CACGCCATGC CCAATTCGTA CAGCAACGAA CTTTACAAAG GTATTCTGGA CGATAACAGC ACGGGCGTTT TCAACGGCAA GATCTTCGTT CGGCCCGACG CGCAAAAAAC CAATGCCTAC CAGTCCTGCA AAAACGTGGT GCTGTCGCCG GGCGCGTCGA TGAACACCAA ACCCCAGTTG GAGATTTATG CCGACGACGT GAAGTGTTCG CACGGAACAA CCACCGGCCA GTTGAACGAC GAAGCTTTGT TCTATATGCG GTCGCGCGGT ATTCCCAAAG ACGAAGCCCG GACGCTATTG CTGTACGCCT TCTCGCAGGA CGTACTGAGC CAGATCAAAA TCCAGCCCAT CCGCGAATAC CTCGAAGGGG TTGTTCGGGA GAAGCTGACG AAGTAA
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Protein sequence | MTPSYASYND FKEQLLASFR DNEERMNGER KSPLHQLRRA ALKQFEQLGF PTIRHEEWKY SNVNSLIKED FALDATSSLT AEDLAPLEIP NLEGNILYFV NGIYHPELSR LVSPSEQVQI TSLAEAIKAD PEFVGTHFAH YADYQDSAFT ALNTAMASDG VVVRVPANTT VEQPIILRFI TDARVNNITS QPRNLIVIGK NAEVMMAESY RTLGEKSSFV NVVTEIVLDR DARMQYYKVL NETAKAYHIG TTQVHQSDNS HFYSASITLN GHFVRNNLNI VLNGQHAEAF MYGLYMPNGR QHVDNHTLVD HAMPNSYSNE LYKGILDDNS TGVFNGKIFV RPDAQKTNAY QSCKNVVLSP GASMNTKPQL EIYADDVKCS HGTTTGQLND EALFYMRSRG IPKDEARTLL LYAFSQDVLS QIKIQPIREY LEGVVREKLT K
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