| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Slin_0169 |
|---|
| Symbol | |
|---|
| ID | 8723897 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Spirosoma linguale DSM 74 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013730 |
|---|
| Strand | + |
|---|
| Start bp | 206495 |
|---|
| End bp | 207391 |
|---|
| Gene Length | 897 bp |
|---|
| Protein Length | 298 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 35% |
|---|
| IMG OID | |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_003385033 |
|---|
| Protein GI | 284035103 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 12 |
|---|
| Plasmid unclonability p-value | 0.0226271 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 3 |
|---|
| Fosmid unclonability p-value | 0.00000000000758401 |
|---|
| Fosmid Hitchhiker | Yes |
|---|
| Fosmid clonability | hitchhiker |
|---|
| |
Sequence |
| Gene sequence | ATGGTATTTA ACACGCTAAC AATGACTATC ATAAATAAAT TCTTTATTTA CTTGACGACT
GTATGTATTA TCTACTATGT TTCCATTTGT TCAACTTATG GTCAGCACAT ACAAGGTTCC
ATCTTAGATG CATACAGTCA AGATAAAATT TCTTTTGCAA ATATTTACTA CCCGGCAACC
AATACAGGCA CTTTAAGTAA TGAGAATGGT GACTACTACC TTCAAGTAAA ACAGTATCCT
ATTCAGCTAA TTATTTCTCA TTTAAATTAT GGTTCGGATA CAGTTACGAT CATTCGGCCT
TCTGATAATA ATACCTTTTA TCTTAAGCCT GTTGCTCATG AACTAGCCCC GATAACGGTG
AACAATGTTG GATATAAATT AATTAAACAA GCTTTTGATC GCGCGGATAC CGAAGAGAAA
AGTGCCGTTT TTGGGAAAGC TTTTTATCGT CAGTTAACAA TAAATGGCGA GCAACCGACG
GAAATTCAAG AGGTTGTATA TGAGGTTAAA TTGTCAAGTA ACAAAATAGA AGGTATACAA
ATTAATAATG CTCGGTATGC AAAGATGACC TCAGATGATA AGAAGATATA TGTTGGATTT
ACTAATTTTT CGTATCTAGT ATTAGCGCAG AAAGCTATTG GACGATTAAA GCCAGCGAAA
GATGTACTTT TGTTACCACT GCGGCCAGAC GTAGCTGACT ACTATGATGT TCGAGTAACC
GATATACTGA CACAGGCCAA TGGTGAAAAA ATAGCTAAAC TTGATTGCCA AGTTCGAGAA
GAATACACGA ATCCTGCATT TTCAGGTCAA GTTTATATCA ACATGACTAA TTATAAATTA
GTAAAGGTGC ATGGGACAAT TCCAGATAAC ATGGGAGCTG TAATTATTGA TCCGTGA
|
|---|
| Protein sequence | MVFNTLTMTI INKFFIYLTT VCIIYYVSIC STYGQHIQGS ILDAYSQDKI SFANIYYPAT
NTGTLSNENG DYYLQVKQYP IQLIISHLNY GSDTVTIIRP SDNNTFYLKP VAHELAPITV
NNVGYKLIKQ AFDRADTEEK SAVFGKAFYR QLTINGEQPT EIQEVVYEVK LSSNKIEGIQ
INNARYAKMT SDDKKIYVGF TNFSYLVLAQ KAIGRLKPAK DVLLLPLRPD VADYYDVRVT
DILTQANGEK IAKLDCQVRE EYTNPAFSGQ VYINMTNYKL VKVHGTIPDN MGAVIIDP
|
|---|
| |