Gene Slin_0156 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSlin_0156 
Symbol 
ID8723884 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSpirosoma linguale DSM 74 
KingdomBacteria 
Replicon accessionNC_013730 
Strand
Start bp197498 
End bp198172 
Gene Length675 bp 
Protein Length224 aa 
Translation table11 
GC content55% 
IMG OID 
Producthypothetical protein 
Protein accessionYP_003385021 
Protein GI284035091 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value0.188048 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.0000000507479 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
ATGAATATCC TCTCAATGAG CCAGACGCTG TTTTACCTCA TCGAACAGCA ACCGAATTCT 
GAAAAAGCCG TGACCTACCT GCGTCAGCAG GCCGATACGT TTTCGTCAAA CCCACAAGTC
GCTGTCTTCT ACCGCGTTTT TACGGCCTTA CCGCGTTTTG TCGGGAAACA GCCCGTCGTT
GTTCCGGCGG ATATACAATT TGCCTTGCAG CGGGTACGGC CCGGCTTTAC TGTTCAGGAC
TGGACCCTCG ACCGGCTGGC GCGGGTGTGG TGGCTTCTGC AGCTACCCGC CGACGACCAG
ACTACCTACG TCAAAACAAT CAGCGAGCTC TTCAAAGCGG GCGAACTGAA CGAGCTGGTT
GCTCTCTATT CGGCTCTGCC CGTACTGGCC TATCCCGAAG CATGGAAGTT TCAGGCCACG
GAAGGTATTC GGAACAACAT CGCCGATGTG CAGTCGGCCA TTATGCTCCA CAACCCGTAC
CCCGCCGATT ACTTCGACGA ACCTGCCTGG AATCAGCTGA TTATGAAGGC GTTTTTTACG
GATAAAGACG TTACGCAGAT CATCGGTCTG AACGAACGCA ACAACGCCCG GCTCGCTCAA
ACGCTGACAG ACTTTGCTGC CGAACGCCGG GCGGCCGGGC GTAGTTTGCC CGCTCATATG
GAGGAGTTGA TGTGA
 
Protein sequence
MNILSMSQTL FYLIEQQPNS EKAVTYLRQQ ADTFSSNPQV AVFYRVFTAL PRFVGKQPVV 
VPADIQFALQ RVRPGFTVQD WTLDRLARVW WLLQLPADDQ TTYVKTISEL FKAGELNELV
ALYSALPVLA YPEAWKFQAT EGIRNNIADV QSAIMLHNPY PADYFDEPAW NQLIMKAFFT
DKDVTQIIGL NERNNARLAQ TLTDFAAERR AAGRSLPAHM EELM