Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Slin_0156 |
Symbol | |
ID | 8723884 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Spirosoma linguale DSM 74 |
Kingdom | Bacteria |
Replicon accession | NC_013730 |
Strand | + |
Start bp | 197498 |
End bp | 198172 |
Gene Length | 675 bp |
Protein Length | 224 aa |
Translation table | 11 |
GC content | 55% |
IMG OID | |
Product | hypothetical protein |
Protein accession | YP_003385021 |
Protein GI | 284035091 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 17 |
Plasmid unclonability p-value | 0.188048 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 8 |
Fosmid unclonability p-value | 0.0000000507479 |
Fosmid Hitchhiker | Yes |
Fosmid clonability | hitchhiker |
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Sequence |
Gene sequence | ATGAATATCC TCTCAATGAG CCAGACGCTG TTTTACCTCA TCGAACAGCA ACCGAATTCT GAAAAAGCCG TGACCTACCT GCGTCAGCAG GCCGATACGT TTTCGTCAAA CCCACAAGTC GCTGTCTTCT ACCGCGTTTT TACGGCCTTA CCGCGTTTTG TCGGGAAACA GCCCGTCGTT GTTCCGGCGG ATATACAATT TGCCTTGCAG CGGGTACGGC CCGGCTTTAC TGTTCAGGAC TGGACCCTCG ACCGGCTGGC GCGGGTGTGG TGGCTTCTGC AGCTACCCGC CGACGACCAG ACTACCTACG TCAAAACAAT CAGCGAGCTC TTCAAAGCGG GCGAACTGAA CGAGCTGGTT GCTCTCTATT CGGCTCTGCC CGTACTGGCC TATCCCGAAG CATGGAAGTT TCAGGCCACG GAAGGTATTC GGAACAACAT CGCCGATGTG CAGTCGGCCA TTATGCTCCA CAACCCGTAC CCCGCCGATT ACTTCGACGA ACCTGCCTGG AATCAGCTGA TTATGAAGGC GTTTTTTACG GATAAAGACG TTACGCAGAT CATCGGTCTG AACGAACGCA ACAACGCCCG GCTCGCTCAA ACGCTGACAG ACTTTGCTGC CGAACGCCGG GCGGCCGGGC GTAGTTTGCC CGCTCATATG GAGGAGTTGA TGTGA
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Protein sequence | MNILSMSQTL FYLIEQQPNS EKAVTYLRQQ ADTFSSNPQV AVFYRVFTAL PRFVGKQPVV VPADIQFALQ RVRPGFTVQD WTLDRLARVW WLLQLPADDQ TTYVKTISEL FKAGELNELV ALYSALPVLA YPEAWKFQAT EGIRNNIADV QSAIMLHNPY PADYFDEPAW NQLIMKAFFT DKDVTQIIGL NERNNARLAQ TLTDFAAERR AAGRSLPAHM EELM
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