Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Slin_0155 |
Symbol | |
ID | 8723883 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Spirosoma linguale DSM 74 |
Kingdom | Bacteria |
Replicon accession | NC_013730 |
Strand | + |
Start bp | 193938 |
End bp | 197399 |
Gene Length | 3462 bp |
Protein Length | 1153 aa |
Translation table | 11 |
GC content | 55% |
IMG OID | |
Product | multi-sensor signal transduction histidine kinase |
Protein accession | YP_003385020 |
Protein GI | 284035090 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 10 |
Plasmid unclonability p-value | 0.359014 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 9 |
Fosmid unclonability p-value | 0.0000017622 |
Fosmid Hitchhiker | Yes |
Fosmid clonability | hitchhiker |
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Sequence |
Gene sequence | ATGATTGAGC GTGAATCGTT AGAGCCGTTT TTAGCCGGTG GTGGAGAGAT GGGACACTTG ATCCGATCGC TGGATTGGGC AAAAACGCCC CTTGGTCCTA TTTCCGCCTG GCCTCAGAGC CTGCGAACGT CGGTTAGCTT GTGCCTCTCG TCAACGTTTC CTATTCTTAT TGCCTGGGGG CCCGAAACCA TTCAGCTTTA CAATGACAGT TATCGACCCA TCTGTGGTGC CAAGCATCCG GAGTCGATGG GGCAGAATTT TCGTATCTGC TGGGAAACAG CGCTGCCCGT TGTCGGGGAT GCCTTTACAC GGGGGCAGCA GGGCGAAGGA ACCTATATTA AAGACCAGCG TATGTTTCTG GATCGGTATG GCTATCTGGA AGAAGCGTTC ATGACGTTTT CTTTCGCACC TATCCGGGAT GAGTCCGGTG ATGTAGGCGG CATTTTTCAC CCCATCACCG AAACAACTGA CAAGATGCTC AGTGCCCGCA GAACCCAGGT TCTGCGGGAT GTGGCGGCCC TTGTTGGACA GGCAAAAACC AATCAGGATA TCTACGCCAG TTTAGTAGAA GCGCAGAGCG GGTTTGAGCT GGATTTGCCT TATTTGCTGT TTTACGAACT TGAGGAGGAT GGAAAACAGG CCAGACTCGT CAGTACGGCC GGGCTGGCCG TCGATGTAGT GGTACCGCCC AATCTGAACC AGTTGGTCGT AGCCGAAACG GACTGGCTCG CCAACCTGCC GGAAACGCTG ATCATTGACC GGTTGGACGA GCGTGTCGGT CCCCTCGTGG GCGGCCCTTA TACGGAGTTT CCCCATACTG CCGTCCGGCT ACCCATTCTG CTGTCGACCC GCGATCAGCC CACCGGGTTT TTACTCGCGG GGGTCAGTTC GCGTCGGGCA CTCGATCAGG ATTACCTTAA CTTTTACGCG CTTCTGGCCA ATACGATTAG CACTGCTTTC TCGAATGTGC ATGCGTATCA GGAGGAGCAG AAACGAGCCG AAGCGCTGGC TGCTATCGAC CAGGCCAAAA CGGCGTTCTT CAATAATATC AGCCACGAGT TTCGGACACC GCTGACCCTG ATGCTCGGTC CACTGGAAGA GCTATTGCAG GATACTGCCC TTCAGGAATC GACTTATAAA CAACCCATAG AAGCCACCCA CCGCAATGCC CTGCGGTTGC TGAAACTGGT CAATAACCTG CTCGATTTCA GTCGTATTGA AGCCGGTCGG GTAAAAGCCA GCTTCCGCCC CGTCGATCTG GTCGGGCTGA CCGTCGATCT CGCCAGCAGT TTCCGCTCCC TGATCGAACG GGCCGGATTG GAATTGAGCG TCGACTGTGA GCCGATGCCC GCTGTGGTGT ATGCCGATGC CGAGATGTGG GAGAAAGTCG TGCTTAATCT GTTGTCAAAC GCCTTTAAAT ACACGCTGAA AGGCCATATA GGGGTTCAGC TGACTGCCGA AGCCGATGGT GTTGTCCTTC GGGTATCAGA CACGGGTGTG GGCATCCCGG CGGCAGAGCT GCCCCACATG TTTGAGCGTT TTCACCGGGT TGCCAATGCC GGTGGCCGGA CTTATGAGGG CAGTGGCATT GGGCTCTCGC TGGTGCATGA ACTGGTGCGT TTGCATGGCG GCACAATTAC CGTAACAAGT CGGGAAGGCG AGGGGAGTAC GTTTACGGTA CGTTTGCCGC TGGGGAAAGA TCACCTGCCT CAGGATCAGG TGATCGAAGG CAGCTACCAG AACCAGAAGA GCCAGTTGAC CGATACGTTC CTGCAGGAAG CCCGGACCAT GCTCTCGGAA GAGATGTTGT CCGTAGACGT TGGCCGAATG CCGTCGGAAG CGGTTGAGTT CGACCAGGCA ACGAAGATTC TGGTGGTCGA CGATAATGCC GATATGCGGG CGTACCTGAC CCGGCTGCTG GCCCCTTATT TCACGGTCAG CACTGCTGTA AATGGGGCCG ATGCGATCCG GCAATTGGCC ACAGACCTGC CTCAGCTTAT CCTGAGCGAT ATTATGATGC CGGTGATGGA CGGGAAAGAA CTGCTGCGCC GGGTGAAGCA AAATCCGGTT ACGGCCCCCA TTCCGCTTAT CTTTCTATCA GCCAGAGCCG GTCAGGAAGC CCGAATTGAT GGGCTCGAAG CCGGAGCAGA CGACTATCTG GTAAAACCGT TTTCGAGCCT GGAACTCCTG ACCAAAATCA GGGCGCAGAT TAACCTGAAC CAGACCCGTC GACAGGGCGA AACCCGCCTG CGAAGTCTGG TAGAACAGGC TCCGGTAGCC ATGCTCCTGA TGAAAGGCAG TAATCTGGTC ATCGATCTGG TTAACCAGGC CATGCTGGAG CTTATTCAGC GGGAGAAAGA TATACTGGGT AAACCCCTTG TCGACGCAAT GCCGGAATTG AACGGGCAGG GGTTTATAGA CCGCTGCCTG ACGGTGTACC AGACTGGTGT TCCCGATCAG GGGTGGTCCA TTGCCATACC TGTTAACCGG AACAACCGCG TCGAAACGGG TTATTTCAAC ATACTGCTTA CACCTTATTA CGAGGGGAAT GCCATTACGG GCGTGCTGGA GGTGTGCACC GAAATAACCG AGCTTGTGGA GGTCAACAAA GCACTGGCCA CCAGCGAAGA CCGGTACCGC CAGCTATCAA CGGCCCTGGA TGAGCAGGTT CAGCAACGCA CGGCGGAGCT ACAGGCGTCG ATCCACGATT TGCAGCGGTC TAACGACAAT CTTCAGCAGT TCGCCTATGT GGCGTCGCAC GATTTGCAGG AACCGTTGCG CAAAATACAG TCGTTCGGCG ATCTTCTCAA AAACCAGTAT GCCGACAATC TGGGCGAAGG CATCGACTAT CTGAAACGGA TGCAGACGGC AGCCAATCGA ATGTCGACGC TCATCCGCGA CTTGCTGAGC TTCTCCCGAA TCACCACTCG ACAGGAAGTG ACCGAGACTG TTTCACTGGC CGAAACGCTC AGTATGGTCG TCCTGGATCT GGAGGTGATG ATTCAGGAGA CCGGTGCCGA AATGCGAATC CATCCGTTGC CAACGGTACT GGGTGACCGT TCACAACTGA TTCAGCTCTT TCAGAATTTG CTATCCAATG CCCTTAAATT CCGACGGAAG AGTTCGGCCG GTGTGTCGGT GCCACCGGTA GTTGAGGTAA GTGCTCAACT GGTAAACGTG TCGGAACTGC CTTCTACTGT GAGGCCCACT CGCTCGGTAG CCGCGTATTA CCGCATCGAT GTGACGGACA ACGGAATCGG ATTCAATGAG AAATACCTGG ATCGTATTTT TCAGGTGTTT CAGCGGCTGC ACGGCAAAAG TGAGTTTCAG GGTACAGGGA TCGGTCTGGC GATTTGCGAA AAGGTGGTTG CGAATCATGG GGGGGTAATT ACGGCCCAAA GTCAGCCCGG CGAAGGGGCT ACCTTCAGCG TATATCTGCC CGCAGTTTCG TTTCAGGACT AG
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Protein sequence | MIERESLEPF LAGGGEMGHL IRSLDWAKTP LGPISAWPQS LRTSVSLCLS STFPILIAWG PETIQLYNDS YRPICGAKHP ESMGQNFRIC WETALPVVGD AFTRGQQGEG TYIKDQRMFL DRYGYLEEAF MTFSFAPIRD ESGDVGGIFH PITETTDKML SARRTQVLRD VAALVGQAKT NQDIYASLVE AQSGFELDLP YLLFYELEED GKQARLVSTA GLAVDVVVPP NLNQLVVAET DWLANLPETL IIDRLDERVG PLVGGPYTEF PHTAVRLPIL LSTRDQPTGF LLAGVSSRRA LDQDYLNFYA LLANTISTAF SNVHAYQEEQ KRAEALAAID QAKTAFFNNI SHEFRTPLTL MLGPLEELLQ DTALQESTYK QPIEATHRNA LRLLKLVNNL LDFSRIEAGR VKASFRPVDL VGLTVDLASS FRSLIERAGL ELSVDCEPMP AVVYADAEMW EKVVLNLLSN AFKYTLKGHI GVQLTAEADG VVLRVSDTGV GIPAAELPHM FERFHRVANA GGRTYEGSGI GLSLVHELVR LHGGTITVTS REGEGSTFTV RLPLGKDHLP QDQVIEGSYQ NQKSQLTDTF LQEARTMLSE EMLSVDVGRM PSEAVEFDQA TKILVVDDNA DMRAYLTRLL APYFTVSTAV NGADAIRQLA TDLPQLILSD IMMPVMDGKE LLRRVKQNPV TAPIPLIFLS ARAGQEARID GLEAGADDYL VKPFSSLELL TKIRAQINLN QTRRQGETRL RSLVEQAPVA MLLMKGSNLV IDLVNQAMLE LIQREKDILG KPLVDAMPEL NGQGFIDRCL TVYQTGVPDQ GWSIAIPVNR NNRVETGYFN ILLTPYYEGN AITGVLEVCT EITELVEVNK ALATSEDRYR QLSTALDEQV QQRTAELQAS IHDLQRSNDN LQQFAYVASH DLQEPLRKIQ SFGDLLKNQY ADNLGEGIDY LKRMQTAANR MSTLIRDLLS FSRITTRQEV TETVSLAETL SMVVLDLEVM IQETGAEMRI HPLPTVLGDR SQLIQLFQNL LSNALKFRRK SSAGVSVPPV VEVSAQLVNV SELPSTVRPT RSVAAYYRID VTDNGIGFNE KYLDRIFQVF QRLHGKSEFQ GTGIGLAICE KVVANHGGVI TAQSQPGEGA TFSVYLPAVS FQD
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