| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Slin_0116 |
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| Symbol | |
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| ID | 8723844 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Spirosoma linguale DSM 74 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013730 |
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| Strand | + |
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| Start bp | 141672 |
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| End bp | 144143 |
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| Gene Length | 2472 bp |
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| Protein Length | 823 aa |
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| Translation table | 11 |
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| GC content | 54% |
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| IMG OID | |
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| Product | TonB-dependent receptor plug |
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| Protein accession | YP_003384987 |
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| Protein GI | 284035057 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 15 |
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| Plasmid unclonability p-value | 0.797457 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 23 |
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| Fosmid unclonability p-value | 0.0887465 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCCGGAAA TTTATATAAT GCGAAAAACT TTACTGCTAC TTTCAATTAC GCTGCTCGGT
CTGGTGTCCG TTAACGCGCA AACCCTCGTG AGCGGGCGAA TTCTGGATAA AGTTACCAGT
CAGCCGGTTC CCTTTGTCAG TGTGGCCCTC TATCGCCAGC CCGATTCGGT GGCCATTGGC
GGAGCCATAA CCGATTCCTC CGGCCAGTTT CGGATTGTAG AAGCGAAAGC CGGAGTCTAT
ACACTGCGTA CGTTTTTTGT TGGCTATAAA CCGGTTTCGA TGCCACTCAC GGTTGTCCGA
AATCAGCCAC TTGAATTGGG TGCGTTGCTG CTGGAAGGCG ATTCCCGGTT ACTTAACGAA
GTCCGCGTTG CTGGACAGCG AACCGATGTC GTCATGCAGG CCGACCGCCA GACCTATCGG
GCGGCTCAGT TTCAATCTGC TGCCGGTGGT ACGGCTACCG ATATTCTGCG TAATCTGCCC
GGCCTGAGCA TTAATGCCGA AGGGGATGTG AGTCTGCGGG GTGCCAATGG CTTTCTGGTG
CTGCTAAATG GAAAACCTGT TCAGGCTAAT TTGGGAACGC TCCTCAATCA GATGCCAGCG
AACAGCATCG AGTCGATCGA AGTAATCACG ACCCCCAACG CCCGCTACGA CCCCGATGGG
AAAGCGGGCA TTATTGCCAT TGTGACCAAG AAAGGTGTCG ATACCGGCTG GTCGGCGCAG
GTAAACGGCC TGATTGGTCT GCCCAGCACA AACGCGTTCG GGAACGCCTA CAACCCCGTT
CGGTATAGTC CAGATGTGAC GCTCAACTAC CGTTCGGCGC GGTGGGATGT AACACTAAGT
TCGGCTTACA TCCGCAACGA CATTGCCGGA CGGCGCGAAG GCGATGTGAA CACTACCATC
GGTAATCGCC TGACCCGCTT TCCTTCCATA GGGGAGCGGA GTTTTGACCG CTATACCTTT
ACCAACCGCA TCGCTGTTGC TTTTGTACCC AATAAAAACA CAACCTGGAC GCTGGGACTT
TACCAGAGCC AGCGTACCGA AGACCGGCTG GCCGATATTG CCTACACCAA CAGTACAACC
AATCTACTGA CGGGCCAAAC CTACAACCAG CGCGCTTATT TCAACAGCAA TCTAGTGCGC
AAGGGTGGCC GGTTCTATAC TGCCAACCTC GATTATGCCC ACACCTTTGC CAATAAGGCT
ACGCTGAGCG CGGGTGCCCT GTATGAGTAT GACCTGATCG ACGGCTTTAC CAGTAACCGC
AACGTCAATC GGAATAATTA CCGCGATACG CTCCAGTATT CGTACTCGAC CACCAACCGG
CCTATTCAAA ATTTCCGGGC CAACGTCGAT GGTAGCCTGC CTTTTTTAGG CGGAAAGCTG
GAAGGCGGTT ATCAATACCG CTACCAGGAA GATACGGGCG ATTACCGGTA TCGGCAGCAG
GATGGAAATG GGTCGCCGTT GCTGGTCGTT CCGGCCTTTA CCGGCCGTAC CGCCATTAGC
AGCCGTATCC ATAGCTGGTA CACGCAATAT GGCGCGGTGG CCAAAAAGCT GGAATATACG
CTGGGCCTGC GCTATGAATA CGCCGTACGG GAGGTGCTGT CGCTGCCTGC CAATCAGACC
TATGTGCTGA CGCTGAACAA CCTGTTCCCG TCGTTCAACA TGCTTTACAA ACCCAAAGGC
GGACTGGCCC TGCGCGCTGG ATTCAGTCGG CGGGTGCAGC GCAACAGCAA TTTTGCTCTC
AATCCACTGC CCGAACGCGA ACACTCCGAA ACCCTCGAAC AGGGTGATCC GAACCTGTTG
CCCGAGTTTG TTAATCTGGC TGAATTGGGC GTGAGTAAAG ATGTTGGTCG GAGTACGCTG
CTGGCGACGG TCTATTATCA GGGCGTACAG AACACCATCA ACCGGGTCAA CCGGGTGTTT
GCCGATACCA TCCTGAGCCG GATATTTACA AACGCTGGTT TAACGCAACG GTTGGGCGTC
GAGCTGGCCA CCGATCTGAA ACTCACCAAA AGCTGGAAGC TTTATGTGGG GGGAACGGTC
TACCGATTCA CACAGCAGGG GCAGCTTTTC CAGAATGAAG TTATTTTCGA CCGGGCAGCC
TGGGTGTATT CGGTCAATGC CAACTCGACG GTGCAAATTA GTCCAACGCT TATCTGGCAG
GCCAACGTCA ACTACCTCTC CCGGCGTATC ACTGCCCAGG GCGAAGATTC CCGGTTTCTG
ATACCTAATA TGTCGGTGAA AAAGAGTTTG ATGGGCAGTC GCCTGACCAT TATGGCGCAA
TGGCAGAACA TCGGTCTGGG ATTCCTGCCC ACCAACGAGC AGCGGATCAC CACCTACGGG
AAGGACTTCT ACACGACGAC GAACTACATT CAGGAGAAGG ATATTTTCCT GATCAACCTA
AGCTATTCAT TCCGGCAACT CAGTAAACGG GCAAAACTGC CGGGAAATGA TTTCGGCGAA
AAAGAATTTT GA
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| Protein sequence | MPEIYIMRKT LLLLSITLLG LVSVNAQTLV SGRILDKVTS QPVPFVSVAL YRQPDSVAIG
GAITDSSGQF RIVEAKAGVY TLRTFFVGYK PVSMPLTVVR NQPLELGALL LEGDSRLLNE
VRVAGQRTDV VMQADRQTYR AAQFQSAAGG TATDILRNLP GLSINAEGDV SLRGANGFLV
LLNGKPVQAN LGTLLNQMPA NSIESIEVIT TPNARYDPDG KAGIIAIVTK KGVDTGWSAQ
VNGLIGLPST NAFGNAYNPV RYSPDVTLNY RSARWDVTLS SAYIRNDIAG RREGDVNTTI
GNRLTRFPSI GERSFDRYTF TNRIAVAFVP NKNTTWTLGL YQSQRTEDRL ADIAYTNSTT
NLLTGQTYNQ RAYFNSNLVR KGGRFYTANL DYAHTFANKA TLSAGALYEY DLIDGFTSNR
NVNRNNYRDT LQYSYSTTNR PIQNFRANVD GSLPFLGGKL EGGYQYRYQE DTGDYRYRQQ
DGNGSPLLVV PAFTGRTAIS SRIHSWYTQY GAVAKKLEYT LGLRYEYAVR EVLSLPANQT
YVLTLNNLFP SFNMLYKPKG GLALRAGFSR RVQRNSNFAL NPLPEREHSE TLEQGDPNLL
PEFVNLAELG VSKDVGRSTL LATVYYQGVQ NTINRVNRVF ADTILSRIFT NAGLTQRLGV
ELATDLKLTK SWKLYVGGTV YRFTQQGQLF QNEVIFDRAA WVYSVNANST VQISPTLIWQ
ANVNYLSRRI TAQGEDSRFL IPNMSVKKSL MGSRLTIMAQ WQNIGLGFLP TNEQRITTYG
KDFYTTTNYI QEKDIFLINL SYSFRQLSKR AKLPGNDFGE KEF
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