| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Slin_0115 |
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| Symbol | |
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| ID | 8723843 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Spirosoma linguale DSM 74 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013730 |
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| Strand | + |
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| Start bp | 140621 |
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| End bp | 141502 |
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| Gene Length | 882 bp |
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| Protein Length | 293 aa |
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| Translation table | 11 |
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| GC content | 53% |
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| IMG OID | |
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| Product | Xylose isomerase domain protein TIM barrel |
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| Protein accession | YP_003384986 |
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| Protein GI | 284035056 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 24 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 27 |
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| Fosmid unclonability p-value | 0.221119 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGCTACAA TCGACAGAAA AACGTTTCTC AACCAAATTT CTTTGCTGGC GGGCGCTTCT
CTGCTGACAG GACCGGCTTT TGCCGCCGAA TCGGCAACGG CTAAATCGGC GGTTAAGCTG
GGCTTCGTTA CCTATTTGTG GGGCAAGGAC TGGGACTTGC CGACACTGAT TAAGAACTGT
GCGGATACCA ATATCCTGGG CGTTGAACTA CGCGTTGAAC ATGCCCACAA TGTCATGCCT
GAACTAAACC CGGCCCAACG GCGGGAGGTA AAAAAACGGT TCGCCGATAG TCCGGTCAAA
CTTGTTGGGC TGGGTACGAA CCAGCAATTC GATTATATCG ACCCGGATAA GTTGAAAGCC
TCCATTGAAC GAACAAAGGA GTTTATACGG CTCAGTGCCG ATGTGGGCGG TACTGGTGTT
AAAGTGAAAC CTAACGCCCT GCATAAAGAG GTATCCGTAG AAAAAACAGT GAACCAGATT
GGCGAATCCC TCAACGAACT CGCCCGGTAC GCAGCCGACT TCGGGCAGCA GATCCGGCTG
GAAGTTCACG GCGAGGAAAC GCAGGAACTG CCCATGACCA AACGAATCAT GGACGTGGCC
ACCCACCCCA ACGCTACCAT CTGCTGGAAC TGTAACCCGC AGGATCTGAA CGGTAAGGGC
TTTCAGGCCA ACTTCGACCT GGTAAAAGAT CGCTTCGGCG CGACCTGCCA CGTCCGCGAA
CTCGACCGGA CCGATTACCC CTATCAGGAC TTGCTAAATA ACCTGGTGGC GATGAACTAT
AAAGGCTGGG TACTTCTCGA ATGCCACACC AACCCGGCCG ATAAAGTAGC GCAGATGAAA
GCTCAGCGAG CGGTATTCGA CCGGATGATA ACCAGGGGGT GA
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| Protein sequence | MATIDRKTFL NQISLLAGAS LLTGPAFAAE SATAKSAVKL GFVTYLWGKD WDLPTLIKNC
ADTNILGVEL RVEHAHNVMP ELNPAQRREV KKRFADSPVK LVGLGTNQQF DYIDPDKLKA
SIERTKEFIR LSADVGGTGV KVKPNALHKE VSVEKTVNQI GESLNELARY AADFGQQIRL
EVHGEETQEL PMTKRIMDVA THPNATICWN CNPQDLNGKG FQANFDLVKD RFGATCHVRE
LDRTDYPYQD LLNNLVAMNY KGWVLLECHT NPADKVAQMK AQRAVFDRMI TRG
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