Gene Slin_0113 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSlin_0113 
Symbol 
ID8723841 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSpirosoma linguale DSM 74 
KingdomBacteria 
Replicon accessionNC_013730 
Strand
Start bp136858 
End bp139089 
Gene Length2232 bp 
Protein Length743 aa 
Translation table11 
GC content55% 
IMG OID 
Productaldehyde oxidase and xanthine dehydrogenase molybdopterin binding protein 
Protein accessionYP_003384984 
Protein GI284035054 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones24 
Fosmid unclonability p-value0.116885 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAGAACG ACGAAAAAAG TCCAGCCATT AACCGGGTTG ATGGCCGATT GAAAGTGACG 
GGTGGGGCAA AGTATTTCGC TGAGTTCGAG ATTCCGGGAA CAACCTACTG CGTACTGGTG
ACCAGTACCA TTGCCAGAGG GAGCATTGCC AGCATGGAGA CCAAAAAGGC AGAAGGTGCC
CCCGGTGTGC TGGCGGTATT TACGAACCTG AACCTGCCTA AAATTCCGGG ATTGAACACG
CCCGAGGGTA ATAACGCCAA GAAACCGTCG GGTGGTGAAA CGTACCGGAT GCTTACTGAT
AAGAAGATTC TGTTTGCTGG TCAGCCCATC GCGATGGTCA TTGCCGATAC GCTGGAACGG
GCCCAGTATG CCGCTACGCT GGTTAAAACA ACATATAGCA AACAGCCGCA CCAGACCGAT
CTGGAGAAAC ATAAGGCTAA AGGGGTAATG CCCCAGGGCG AACGAAACGC CGATTACAAA
CGGGGAAATC CGGATACGTA CAAAACGGCC CCGGTGGTGC TGGAAGCCAG CTACACGCTG
CCCATTGAGG TGCACAACCC CATGGAACTG CACGGTATTC TGGTAAATTG GACTGCCGAC
GATCAGGTAA TGATCTACGC CAAAACGCAG GGGGTGCAAA TGACGCAGAA AGCGGTGGCG
AAGGCATTTA AGCTGGATGA AAAGAACGTG CATGTTCACA CCGAATTTAT GGGGGGTGGC
TTTGGCATGG GACTTAAAAC CTGGCCGCAG GAGATTGCCG TGGTGGCAGC CGCCAAAAAA
CTCCGCAAAC CCGTAAAACT GGTCGTTTCC CGCGATCAGA TGTTTACTAT GGTGGGCCAC
CGGCCGTATA CAACGCAAAC CATTTCCATG GGCGCGGATA AAGCGGGTAA GCTGGTGGGT
ATCGTGCACG AAGCCACTGC CGAAACGGCC AGTTACGAAG ACTTTACGGA ATCTACGGTG
GGCATGACGA AGTTTATTTA CAACTGCCCG AACGTTAGCA CGACCTACCG GATTGTGCCG
CTGGATCGGG GTGTGCCCAT CTGGATGCGG GGTCCCGGTG AGGCCACGGG TGCGTTTGCG
CTGGAATCGG CCATGGACGA AATGGCCGCT AAACTGAACC TCGACCCCAT TGAGTTTCGG
CTACGTAATT ATGCCGAAAC GGACCCGGAG AAAAACCGGC CTTTTTCGAG CAAACACCTC
AAAGAAGCTT ACCAGTTGGG AGCGGATAAA ATTGGCTGGT CGAAACGAAA GAATGAGCCG
GGTGCTCTTC GCGACGGCGA ATGGCTGATT GGTTACGGCA TGAGTTCCGG TACGTTCAAT
GCCAGCCGGG GGCAGGCTTC CGCCAAAGTC ATTCTGAATC AGGACGGGTC GCTGGTGATA
CAGAGTGCCG TCACGGACAT CGGGCCGGGT ACGGGAACGG CCATGGTTTC CATCGCTCAC
GACGTGCTTG GGATTCCGGT CGGCCGCATC AAATTCGAAA TGGGGGATAC AACCCTGCCT
AAGGCCCCCA CACAGGGCGG CTCAACCATC ACCTCCACGG TGGGTTCGGC TGTGTATGAC
ACCTGCGCTG CCCTGAAAAC ATCATTGGCT GCGCTGGCTA TTGCACAGGG CAACTCGCCG
TTTTCGGGAA GTAAAGCGGA GGACCTGGTT TTTGAAGACG GTATGATTCA ACTCAAAGGC
GATCGAAAAA AGAAGCTCCC TGTGGGCGAC GTGCTGAAAG CCAACAACCT GCTAACATTG
GACAGAGCGC TGGATTCAAA GGGAGGACCC GAACAGGAGA CCTATTCTAT GTATTCGTTT
TCGGTTCACT TTGCCGAAGT CCGGGTCAAT CCGATTACGG GTGTGGTGCG GGTGAGTAAC
GCCGTTAGTG TAGCTGATTC GGGGCGGATT GTCAGCCCGA AAACGGCGGC CAGTCAAATG
ATTGGTGGGG TTACGGGCGG TATTGGCATG GCCCTGACCG AAGAAGCCGT ACTAGACCAT
CGGTTCGGTC GCCTGGTGAA TAACAACCTG GCTGATTACC ACGTACCTGT GAGCGCCGAC
GTGCCCCACA TCGACACAAT TTTCATCGAC AAACCCGATC CCTACATTAA CCCGATGGGA
GCCAAAGGCA TGGGCGAGAT TGCCCTGATC GGCTTTGCTG CGGCCGTAGC CAATGCCGTT
TACAACGCCA CCGGACAGCG CATCCGCGAT CTGCCCATCA CACCCGATAA AGTGATAAAG
CGCGTGGTTT AG
 
Protein sequence
MKNDEKSPAI NRVDGRLKVT GGAKYFAEFE IPGTTYCVLV TSTIARGSIA SMETKKAEGA 
PGVLAVFTNL NLPKIPGLNT PEGNNAKKPS GGETYRMLTD KKILFAGQPI AMVIADTLER
AQYAATLVKT TYSKQPHQTD LEKHKAKGVM PQGERNADYK RGNPDTYKTA PVVLEASYTL
PIEVHNPMEL HGILVNWTAD DQVMIYAKTQ GVQMTQKAVA KAFKLDEKNV HVHTEFMGGG
FGMGLKTWPQ EIAVVAAAKK LRKPVKLVVS RDQMFTMVGH RPYTTQTISM GADKAGKLVG
IVHEATAETA SYEDFTESTV GMTKFIYNCP NVSTTYRIVP LDRGVPIWMR GPGEATGAFA
LESAMDEMAA KLNLDPIEFR LRNYAETDPE KNRPFSSKHL KEAYQLGADK IGWSKRKNEP
GALRDGEWLI GYGMSSGTFN ASRGQASAKV ILNQDGSLVI QSAVTDIGPG TGTAMVSIAH
DVLGIPVGRI KFEMGDTTLP KAPTQGGSTI TSTVGSAVYD TCAALKTSLA ALAIAQGNSP
FSGSKAEDLV FEDGMIQLKG DRKKKLPVGD VLKANNLLTL DRALDSKGGP EQETYSMYSF
SVHFAEVRVN PITGVVRVSN AVSVADSGRI VSPKTAASQM IGGVTGGIGM ALTEEAVLDH
RFGRLVNNNL ADYHVPVSAD VPHIDTIFID KPDPYINPMG AKGMGEIALI GFAAAVANAV
YNATGQRIRD LPITPDKVIK RVV