Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Slin_0108 |
Symbol | |
ID | 8723836 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Spirosoma linguale DSM 74 |
Kingdom | Bacteria |
Replicon accession | NC_013730 |
Strand | + |
Start bp | 130688 |
End bp | 132694 |
Gene Length | 2007 bp |
Protein Length | 668 aa |
Translation table | 11 |
GC content | 55% |
IMG OID | |
Product | hypothetical protein |
Protein accession | YP_003384979 |
Protein GI | 284035049 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 23 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 23 |
Fosmid unclonability p-value | 0.0893554 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCGTAATT CCATTCGTTT ACTTTTTCTG GCCTGTTTCC TGACCGGTGA GCTAGTCGCA CAGACTTCGC CCGTTACGGT CGATATCTGC GTGTATGGCG GCTCGTCGGC GGGGGTAATC GCGGCTTATA CCGCCCGTCA ACTGGGTAAA TCTGTTATCC TGATCGAGCC GGGGCGTCAT CTCGGCGGCC TCACGACCGG CGGGCTGGGC TACACCGACA TTGGCAATAA GTACGCCATC TCCGGCATTG CCCGCGATTA CTACCGTCAG ATTGGCAAGC ATTACGGGAA GTTCGAACAA TGGATCTTTG AACCCCATGT GGCGGAAGAT CTCTTTAAAT CATACATCAA ACGGGGAGAT GTCAACGTCC TTTACGAACA TCGGCTTCAG TCCGTAAAAA AGCAGGGCAC AGCCATCCAG AGCATTACCC TGGAGTCCTC CTCGGCGGGA AGTGCTACCC GAACCGTTAA CGCCAAAGTC TTTCTCGATT GTACTTACGA AGGCGATCTG CTGGCCAAAG CGGGTGTCAG TTATACCGTT GGCCGCGAAG ACAACAAGAC CTATGGCGAA ACCTACAACG GTTTTCAGTT GCTGGACAAG CACCAGTTTG CCGATGGTGT CGACCCGTAT AAAATACCCG GAAAGCCGGA AAGTGGCCTG TTATGGGGCA TCAGTACGGC AAAGGTGCTG CCAACGGGTA CGGGAAATAA AGACGTGCAG GCGTATAACT TCCGCATTTG CCTGAGCAGC GACCCGGCCA ACAGCATCCC CATTACCCGG CCCGAAGGGT ATGATTCAAC CCGTTATGAA CTGCTGCTGC GAGCCATCGA CAAGAACCCA AAGCTCGCGT TCAACACCAT CCTCAAACCC GACCGGATGC CGAATCAGAA GACGGATATC AACAATAACG GCCCGTTTTC AACCGATATG ATTGGCGTGA ACTACGACTT CCCCGAAGCC AGTTATGCCC GTCGGGCGGC TATTCAGCGG GAGCACGAGC TGTATAACAA AGGGTTACTG TACTTCATCG GGCACGACCC CCGGATGCGC AAAGACATCC AGACCGAAAT GCTCAAATTT GGCTACCCGA AAGATGAATA CACCGACTCG GGCAACTGGT CGACGCAGAT GTACGTTCGC GAAGCCCGGC GTATGGTGGG CGCGCACGTG ATGACCCAGG CCAATTGTCA GGGCCGTGAG GTAGTGCCGG ATGGCGTGGG CATGGCTGCT TACACAATGG ATTCGCACAA TTGCCAGCGG CTGGTGGTTG AGAAAAACGG CATGAAAATG GTCAAGAACG AAGGCGACGT ACAGGTGGGT GGTTTCCCGC CTTACCCGAT TTCGTACCGT TGCCTGACGC CCAAAGCGAC CGAATGCACG AACCTGCTGG TGCCCGTTTG CTTGTCGGCG AGCCACATTG CCTACGGCTC TATCCGTATG GAACCCGTTT TTATGGTGCT GGCGCAATCG TCGGCGGTGG CCGCGGGCAT GGCCATCGAC GGGAAAACAT CGGTGCAGGG CGTTGATATA AAAAAGTTAC AGAGTCAGCT AAAAGCCAAC CCGTTAGCCG ATGGTAGTAC GCCCGAAATC CTGGTTGACA ACGACGACCC GACCCAAACA GCCCGCACCG GCGAGTGGAC GCGGGAAAAC AACCCGAAAG GCGCGTATGG CCCCAGTTAT TTCACCACAG CGGGTAGCGG GTCGGGTATG AAAACCGTCC GGTTCAGCCC GGCGGTGACC AAAGCGGGTA TCTACCACGC GTACATATAC ATCCCTAAAC TGACCGGTGC TTCCAGTAAG ACGAATCTGA TCGTATCGGA TGGTAATCAA CCCAAACCCA TCACCATCCG GGAGTCGGAT ATTCGGGTGG AGGGGCAGAC ATCGGGTGAG TGGGTATCGC TTGGATCATA CAAGCTGTCG CCGGGTAAGA AAAGCTTCGT TGAGGTATCG ACAAAAGACG CCGACGGAAT TGTGGTGGCC GATGCCGTGC TGTTCGTGCC GAATTGA
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Protein sequence | MRNSIRLLFL ACFLTGELVA QTSPVTVDIC VYGGSSAGVI AAYTARQLGK SVILIEPGRH LGGLTTGGLG YTDIGNKYAI SGIARDYYRQ IGKHYGKFEQ WIFEPHVAED LFKSYIKRGD VNVLYEHRLQ SVKKQGTAIQ SITLESSSAG SATRTVNAKV FLDCTYEGDL LAKAGVSYTV GREDNKTYGE TYNGFQLLDK HQFADGVDPY KIPGKPESGL LWGISTAKVL PTGTGNKDVQ AYNFRICLSS DPANSIPITR PEGYDSTRYE LLLRAIDKNP KLAFNTILKP DRMPNQKTDI NNNGPFSTDM IGVNYDFPEA SYARRAAIQR EHELYNKGLL YFIGHDPRMR KDIQTEMLKF GYPKDEYTDS GNWSTQMYVR EARRMVGAHV MTQANCQGRE VVPDGVGMAA YTMDSHNCQR LVVEKNGMKM VKNEGDVQVG GFPPYPISYR CLTPKATECT NLLVPVCLSA SHIAYGSIRM EPVFMVLAQS SAVAAGMAID GKTSVQGVDI KKLQSQLKAN PLADGSTPEI LVDNDDPTQT ARTGEWTREN NPKGAYGPSY FTTAGSGSGM KTVRFSPAVT KAGIYHAYIY IPKLTGASSK TNLIVSDGNQ PKPITIRESD IRVEGQTSGE WVSLGSYKLS PGKKSFVEVS TKDADGIVVA DAVLFVPN
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