| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Slin_0107 |
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| Symbol | |
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| ID | 8723835 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Spirosoma linguale DSM 74 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013730 |
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| Strand | + |
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| Start bp | 129218 |
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| End bp | 130648 |
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| Gene Length | 1431 bp |
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| Protein Length | 476 aa |
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| Translation table | 11 |
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| GC content | 56% |
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| IMG OID | |
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| Product | RagB/SusD domain protein |
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| Protein accession | YP_003384978 |
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| Protein GI | 284035048 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 25 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 29 |
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| Fosmid unclonability p-value | 0.528025 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAAAAAAA ATATAGTTCT TCTTTGCCTG ATTGGGGTGT TAACGTCCTG CGATGTGCTG
GATCAGAAGC CCGAATCCAG TTTTACCCCG GCCAATTTTT ACAAGAATGC CGACGACGCC
AAAGCGGCCG TCAGCGCGGT GTACGATCCG TTGAACAGCA CCAACCTATA CGGACAGGTG
ATGTGGATTT TACAGGATCA GGCTACCGAC GATGCCGAGT GGGGTAATGG CCGCTCGACC
GCCAACCAGC CCAAGAACGA CCTCGACAAA TACACGTTCA CGCCCGCTAC CAATACCTTT
CAGGCCATCT GGTCGACGGT GTATTCGGCC ATCAACCGGG CCAACGCCGT GATTACCCGG
GTGCCCAATA TTCCGATGGA TAATGATCTG AAAGCCCGCT ACATTGCCGA AGCTAAATTC
ATGCGGGGCT TTTATTACTT TACCCTCGTG AGGTTGTTTG GCGGGGTGCC GATCATTACC
GTTGAAACAA CTTCGCTCAA TGACCTGACC GTAGCGCGGG CATCGGCCGA CGACGTGTAT
AAGCTCGTTG TTCAGGACTT CACCGATGCC GAAGCCGTGC TGCCCACAAC CTACTCGACC
GCCGACCGGG GCCGTGCTAC TAAAGGCGCT GCCAAAGCCT TTCTGGCGAA AGTGTATTTG
ACTCGCCAGG ACTGGCCGAA GGCGTCGGCA AAAGCTAAAG AGGTTATTGA CCTGGGCGTT
TATGACCTAT GGGCCAACTT CGCCGATGCG TTTCTGATTG CCAATAAGAA CGGGAAAGAA
GGTGTTTTTG AGATACAGGC ACTGAGTGGT GGTTTCGGCG AGGGGAGTCT GATGCAGGGT
TACATGCGCC CCAACTTCGA CCGCGTGAAC GGCGTGGCCG GATTTGGCGA TGACCCCGCC
ACCGAAAACC TGTACCGGGC CTACCGCGCC GACGACAAAC GCCGGAACGT GACGCTGAGG
CTTTACAGTG CTACCAGCAG CCCGGCCGCT CCGGCCAGTG TGCTGTTTCC CTGCTACGTC
TACAAATACC TGGACCCTAC GGCCACGGGC AATGGCGACG GTGGCAATAA CTACCCCATT
GTGCGCTATG CCGATGTGTT GCTCATGTAT GCCGAAGCCC TCAACGAGCA GACCGCCAAC
AATGCCGATG CCTACGCTAC GGTAAACCGA ATTCGAAACC GGGCCGGGCT GCCTAACCTG
ACCGCCAACC TGAGTCAGGC GCAGTTTCGG GACAGTGTGC TACTGGAACG TCGGCTGGAG
CTGGCCTTCG AGGGGCACCG CTGGTATGAT CTGGCGCGTA CTAAACGGCT GGTGAGTGCT
CTGAAAGCGC AAAACCCAAC AATCCCCGTC GATGAGCACC ATTACCTGTT CCCGATTCCG
CAAACTGAGC GCGATGTAAA CCCCAAACTG GACCAGAACC CGGGGTACTA A
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| Protein sequence | MKKNIVLLCL IGVLTSCDVL DQKPESSFTP ANFYKNADDA KAAVSAVYDP LNSTNLYGQV
MWILQDQATD DAEWGNGRST ANQPKNDLDK YTFTPATNTF QAIWSTVYSA INRANAVITR
VPNIPMDNDL KARYIAEAKF MRGFYYFTLV RLFGGVPIIT VETTSLNDLT VARASADDVY
KLVVQDFTDA EAVLPTTYST ADRGRATKGA AKAFLAKVYL TRQDWPKASA KAKEVIDLGV
YDLWANFADA FLIANKNGKE GVFEIQALSG GFGEGSLMQG YMRPNFDRVN GVAGFGDDPA
TENLYRAYRA DDKRRNVTLR LYSATSSPAA PASVLFPCYV YKYLDPTATG NGDGGNNYPI
VRYADVLLMY AEALNEQTAN NADAYATVNR IRNRAGLPNL TANLSQAQFR DSVLLERRLE
LAFEGHRWYD LARTKRLVSA LKAQNPTIPV DEHHYLFPIP QTERDVNPKL DQNPGY
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