Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Slin_0107 |
Symbol | |
ID | 8723835 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Spirosoma linguale DSM 74 |
Kingdom | Bacteria |
Replicon accession | NC_013730 |
Strand | + |
Start bp | 129218 |
End bp | 130648 |
Gene Length | 1431 bp |
Protein Length | 476 aa |
Translation table | 11 |
GC content | 56% |
IMG OID | |
Product | RagB/SusD domain protein |
Protein accession | YP_003384978 |
Protein GI | 284035048 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 25 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 29 |
Fosmid unclonability p-value | 0.528025 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAAAAAAA ATATAGTTCT TCTTTGCCTG ATTGGGGTGT TAACGTCCTG CGATGTGCTG GATCAGAAGC CCGAATCCAG TTTTACCCCG GCCAATTTTT ACAAGAATGC CGACGACGCC AAAGCGGCCG TCAGCGCGGT GTACGATCCG TTGAACAGCA CCAACCTATA CGGACAGGTG ATGTGGATTT TACAGGATCA GGCTACCGAC GATGCCGAGT GGGGTAATGG CCGCTCGACC GCCAACCAGC CCAAGAACGA CCTCGACAAA TACACGTTCA CGCCCGCTAC CAATACCTTT CAGGCCATCT GGTCGACGGT GTATTCGGCC ATCAACCGGG CCAACGCCGT GATTACCCGG GTGCCCAATA TTCCGATGGA TAATGATCTG AAAGCCCGCT ACATTGCCGA AGCTAAATTC ATGCGGGGCT TTTATTACTT TACCCTCGTG AGGTTGTTTG GCGGGGTGCC GATCATTACC GTTGAAACAA CTTCGCTCAA TGACCTGACC GTAGCGCGGG CATCGGCCGA CGACGTGTAT AAGCTCGTTG TTCAGGACTT CACCGATGCC GAAGCCGTGC TGCCCACAAC CTACTCGACC GCCGACCGGG GCCGTGCTAC TAAAGGCGCT GCCAAAGCCT TTCTGGCGAA AGTGTATTTG ACTCGCCAGG ACTGGCCGAA GGCGTCGGCA AAAGCTAAAG AGGTTATTGA CCTGGGCGTT TATGACCTAT GGGCCAACTT CGCCGATGCG TTTCTGATTG CCAATAAGAA CGGGAAAGAA GGTGTTTTTG AGATACAGGC ACTGAGTGGT GGTTTCGGCG AGGGGAGTCT GATGCAGGGT TACATGCGCC CCAACTTCGA CCGCGTGAAC GGCGTGGCCG GATTTGGCGA TGACCCCGCC ACCGAAAACC TGTACCGGGC CTACCGCGCC GACGACAAAC GCCGGAACGT GACGCTGAGG CTTTACAGTG CTACCAGCAG CCCGGCCGCT CCGGCCAGTG TGCTGTTTCC CTGCTACGTC TACAAATACC TGGACCCTAC GGCCACGGGC AATGGCGACG GTGGCAATAA CTACCCCATT GTGCGCTATG CCGATGTGTT GCTCATGTAT GCCGAAGCCC TCAACGAGCA GACCGCCAAC AATGCCGATG CCTACGCTAC GGTAAACCGA ATTCGAAACC GGGCCGGGCT GCCTAACCTG ACCGCCAACC TGAGTCAGGC GCAGTTTCGG GACAGTGTGC TACTGGAACG TCGGCTGGAG CTGGCCTTCG AGGGGCACCG CTGGTATGAT CTGGCGCGTA CTAAACGGCT GGTGAGTGCT CTGAAAGCGC AAAACCCAAC AATCCCCGTC GATGAGCACC ATTACCTGTT CCCGATTCCG CAAACTGAGC GCGATGTAAA CCCCAAACTG GACCAGAACC CGGGGTACTA A
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Protein sequence | MKKNIVLLCL IGVLTSCDVL DQKPESSFTP ANFYKNADDA KAAVSAVYDP LNSTNLYGQV MWILQDQATD DAEWGNGRST ANQPKNDLDK YTFTPATNTF QAIWSTVYSA INRANAVITR VPNIPMDNDL KARYIAEAKF MRGFYYFTLV RLFGGVPIIT VETTSLNDLT VARASADDVY KLVVQDFTDA EAVLPTTYST ADRGRATKGA AKAFLAKVYL TRQDWPKASA KAKEVIDLGV YDLWANFADA FLIANKNGKE GVFEIQALSG GFGEGSLMQG YMRPNFDRVN GVAGFGDDPA TENLYRAYRA DDKRRNVTLR LYSATSSPAA PASVLFPCYV YKYLDPTATG NGDGGNNYPI VRYADVLLMY AEALNEQTAN NADAYATVNR IRNRAGLPNL TANLSQAQFR DSVLLERRLE LAFEGHRWYD LARTKRLVSA LKAQNPTIPV DEHHYLFPIP QTERDVNPKL DQNPGY
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