Gene Slin_0104 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSlin_0104 
Symbol 
ID8723832 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSpirosoma linguale DSM 74 
KingdomBacteria 
Replicon accessionNC_013730 
Strand
Start bp123953 
End bp124576 
Gene Length624 bp 
Protein Length207 aa 
Translation table11 
GC content56% 
IMG OID 
Producttranscriptional regulator, LuxR family 
Protein accessionYP_003384975 
Protein GI284035045 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones27 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones34 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
TTGCCTTTGC TGCGGAGCGA TACCGAAGCC TCACCCGCTC TGACGGCTGA CAGCGAGTTG 
TTCATTCGCA ACGCCTTTGC TAACGACCCC AAACTGGGTT GTGAACTGCT CTTCCGGCAA
TATTTTGCAC CCCTTTGCAG CCATGCCATT CGCTTCATGT ACGACCGGCA AGCCGCCGAA
GATGTCGTGG CCGATCTCTT CTACACCTTC TACCAGAAAG AGCTTTATAA ACAGGTCAGG
GGATCGTACC GAGCCTATCT CTACCAGGCC GTACGGAACC GGGCCTATAA CTGCCTGCGC
TGGGAATTGA ATCGACAGGA GACATTGCCC GACGACCTGG ACCCCGCCGA TCTCGATGCT
ACTCAACCCG ACCGCCTGTT GCAGCAGGAT GAACTGTACC GGGCGCTGGA GCAGGCCGTT
CAACAGCTAT CGCCCCAACG GCAGCGGGTT TTTCTGTTGA GCCGATTCGA AGGGAAGTCC
TATAAAGAGA TTGCCACTGA AATGAGCCTG TCGCCCAAAA CCGTTGAAAA TCACCTGCTG
CGGGCCATCT CCGCCGTTCG GCAGTTTCTC CGGCACCAGA AGCTGATTAG CTGGGGACTA
CTTCTGCTGA CGATTTTCTC CTAA
 
Protein sequence
MPLLRSDTEA SPALTADSEL FIRNAFANDP KLGCELLFRQ YFAPLCSHAI RFMYDRQAAE 
DVVADLFYTF YQKELYKQVR GSYRAYLYQA VRNRAYNCLR WELNRQETLP DDLDPADLDA
TQPDRLLQQD ELYRALEQAV QQLSPQRQRV FLLSRFEGKS YKEIATEMSL SPKTVENHLL
RAISAVRQFL RHQKLISWGL LLLTIFS