Gene Slin_0096 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSlin_0096 
Symbol 
ID8723824 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSpirosoma linguale DSM 74 
KingdomBacteria 
Replicon accessionNC_013730 
Strand
Start bp113479 
End bp114399 
Gene Length921 bp 
Protein Length306 aa 
Translation table11 
GC content55% 
IMG OID 
ProductPpx/GppA phosphatase 
Protein accessionYP_003384967 
Protein GI284035037 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones23 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones35 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAGCAAG CCATTATCGA CTTAGGTACC AATACATTTC ATCTTCTAAT CGCCGAAAAA 
ACTGATACCG GCTATACAAC GCTGTTTCGC GAAAGTCGGC CTGCCAAAAT CGGACAAGCC
GGTATCAATC AGGGAATCAT TACAGAAGCC GGTATCGACC GGGCGCTGGG CGTACTCACG
TATTTCCGGC AAGTGCTCGA CCAGCATGCC GTAGCACCCG ATCAGGTCAT GGCCACGGGT
ACCAGCGCCA TTCGGGTAGC CCGTAATCAG CAGGAGTTTA TCGACCGGGT TCGGGCCGCA
ACGAGCATCC CGATTCGGGT AATTTCCGGG GAGCAGGAAG CCGAATACAT CTATAAAGGC
GTTCGGGCAG CCGGGGCACT GGACGAGACT ACCGCTCTGG TGATGGATAT TGGCGGGGGC
AGCGTCGAGT TTATCCTGGG CAACCAAACG CGTATCTTCT GGAAACAGAG CTTCGAGATT
GGCGGGCAGC GGCTTCGCGA ACGGTTCATG TCTACAGACC CTATTGGTTC GGGTAGCATC
CGTCGGCTTC ACGATTATTT CCAGGAACAG TTACTGCCGC TGGCCAACGC CATTCACCAA
TATGAGCCCA CGGTGCTGGT GGGCTCTTCG GGGTCCTTCG ATACGCTGGT GGATATGTGG
TTCATGCACG AACAGGGCCA CCTGCCCGAT CCTCAGCAGG CCACCTTTAC CCTGCCCGTT
GCCGAGTTTT ACCGGGCTTA CGAGCTACTG ATTACCCGCA ATCACGAAGA GCGTATGCAG
ATTCCCGGCA TGATCGAGCT GCGCGTCGAC ATGATCGTGG TGGCCGTTTG CCTGATCGAC
TTTGTGCTGA AAACGCACGG CATTTCGCAG ATACGCACCT CAACGTATTC ATTGAAAGAA
GGGGTGCTGG CAACACTGTA G
 
Protein sequence
MKQAIIDLGT NTFHLLIAEK TDTGYTTLFR ESRPAKIGQA GINQGIITEA GIDRALGVLT 
YFRQVLDQHA VAPDQVMATG TSAIRVARNQ QEFIDRVRAA TSIPIRVISG EQEAEYIYKG
VRAAGALDET TALVMDIGGG SVEFILGNQT RIFWKQSFEI GGQRLRERFM STDPIGSGSI
RRLHDYFQEQ LLPLANAIHQ YEPTVLVGSS GSFDTLVDMW FMHEQGHLPD PQQATFTLPV
AEFYRAYELL ITRNHEERMQ IPGMIELRVD MIVVAVCLID FVLKTHGISQ IRTSTYSLKE
GVLATL