| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Slin_0093 |
|---|
| Symbol | |
|---|
| ID | 8723821 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Spirosoma linguale DSM 74 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013730 |
|---|
| Strand | - |
|---|
| Start bp | 107529 |
|---|
| End bp | 108533 |
|---|
| Gene Length | 1005 bp |
|---|
| Protein Length | 334 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 55% |
|---|
| IMG OID | |
|---|
| Product | Bile acid:sodium symporter |
|---|
| Protein accession | YP_003384965 |
|---|
| Protein GI | 284035035 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 30 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 41 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAAAGCTG AAACCAATGA CCGCTCGTCA TACAGCAATT TGATTTATAC AGCCCTGATC
ATTGTGGCGG TAACCACAGC TCTGATTTTT CCGGGACCTT TCACCAGTAT CGGCGATTTT
CCCCTGAAAA AACTGATTGT TCCCCTCCTG CAAATCATCA TGCTGGGCAT GGGAACCACC
ATGTCGATCA AGGATTTTGA AGGCGTCATT AAGCAACCCA AAGCTGTTTT CATTGGCGTC
ACCTGCCATT TTATGATCAT GCCCCTGCTG GGTTACACGC TAGCCAACGT ATTCAAATTT
CCGCCCGAAA TAGCGGCCGG CGTGGTACTG ATCGGCTGTT CGCCCAGCGG GCTTGCGTCC
AACGTCATGT GCTTCATTGC CAAGGCTAAT GTACCGCTGT CCATCACGGT AACAACCCTG
TCAACGCTGC TGGCTCCCTT CCTGATGCCC GCGCTGATGA CGCTGCTGGC GGGCCAGTTC
ATTGAAATAT CGTTTTGGAA AATGATGGTC GAGATTATGG AAATCGTCAT TTTGCCCGTG
CTGGTCGGGC TGGCGCTGAA CCGGATTTTC CATAAGTCAG CCGTGATGCT CAACCGCGTG
ATGCCGCTTA TTTCCATGGG TGGTATCGTT CTGATTGTTG CGATCATCAC AGCCGCCGGT
CGCGATAGCC TGCTGACGGT GGGCTGGACA CTGGCCCTGT GCGTGCTGAT TCACAACCTG
ACGGGCTTTA CGCTGGGTTA CTGGAGTGCC CGGCTGTTCG GTCTGGACGA ACAGAGTTCC
CGCACCGTAG CCATTGAGGT AGGCTTGCAG AATGGCGGGT TAGCCTCGGG CATTGCCGTT
CAGATGGGCA AAGTGGCCAC GGTTGGCCTC GCCCCTGCCC TCTTCGGCCC TATCATGAAC
ACGACCGGTT CGCTGCTGGC CACCTACTGG AGCCAGAACC CACCCAAAGA TGTGGCGCTC
AGCGAAACGA CACCCATTCA GTCGGTGTCG TCGCAGGACG TTTAA
|
|---|
| Protein sequence | MKAETNDRSS YSNLIYTALI IVAVTTALIF PGPFTSIGDF PLKKLIVPLL QIIMLGMGTT
MSIKDFEGVI KQPKAVFIGV TCHFMIMPLL GYTLANVFKF PPEIAAGVVL IGCSPSGLAS
NVMCFIAKAN VPLSITVTTL STLLAPFLMP ALMTLLAGQF IEISFWKMMV EIMEIVILPV
LVGLALNRIF HKSAVMLNRV MPLISMGGIV LIVAIITAAG RDSLLTVGWT LALCVLIHNL
TGFTLGYWSA RLFGLDEQSS RTVAIEVGLQ NGGLASGIAV QMGKVATVGL APALFGPIMN
TTGSLLATYW SQNPPKDVAL SETTPIQSVS SQDV
|
|---|
| |