Gene Slin_0090 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSlin_0090 
Symbol 
ID8723818 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSpirosoma linguale DSM 74 
KingdomBacteria 
Replicon accessionNC_013730 
Strand
Start bp105899 
End bp106429 
Gene Length531 bp 
Protein Length176 aa 
Translation table11 
GC content51% 
IMG OID 
Producthypothetical protein 
Protein accessionYP_003384962 
Protein GI284035032 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones28 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones42 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAACCTA CTTTTCTGCA AACCAGCCGT ACCGAGTCGT TCAAAACCTG GCGCTTTCGC 
CAGTTGATGA ACTGGTACCC AATGTATTTC GGAACCGGCG GAAAAATTCT GTTCTGGTCG
GGCGATTCGC GGGAAGTACA TCTGCGTTTG CGTCGAAACA TGTGGACCTA TAACTATGTC
GGCACCATCT TTGGCGGCAG TATGTTCGCT GCCGCCGACC CGTTTTACAT GCTCATGCTG
CTACAGATTT TAGGAAAGCA GTATGTCGTA TGGGACAAAA CGGGTAGCAT CCGGTTTCGG
AAACCCGGTC GCCAGACGCT CTACGCCCGC TTCGACATTA CCGATGAACA ACTCGACACT
ATCCGGCGGG CGGTAGCGGA AAATGGGCAA ACCGAACAGA CGTTCAGCCT TGACTGGGTA
GACAGCGAAG GCGTTATTCA CGCCCAGATC GAACGACTTT GCTACATTGC CGATAAACAG
CATTACGAAC AGCGAAAGAA CGACCGTCAA CAATCACGAT TTCAGCGGTA A
 
Protein sequence
MKPTFLQTSR TESFKTWRFR QLMNWYPMYF GTGGKILFWS GDSREVHLRL RRNMWTYNYV 
GTIFGGSMFA AADPFYMLML LQILGKQYVV WDKTGSIRFR KPGRQTLYAR FDITDEQLDT
IRRAVAENGQ TEQTFSLDWV DSEGVIHAQI ERLCYIADKQ HYEQRKNDRQ QSRFQR