| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Slin_0088 |
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| Symbol | |
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| ID | 8723816 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Spirosoma linguale DSM 74 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013730 |
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| Strand | - |
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| Start bp | 103992 |
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| End bp | 105017 |
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| Gene Length | 1026 bp |
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| Protein Length | 341 aa |
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| Translation table | 11 |
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| GC content | 51% |
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| IMG OID | |
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| Product | Xylose isomerase domain protein TIM barrel |
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| Protein accession | YP_003384960 |
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| Protein GI | 284035030 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 29 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 39 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCTGAAAC GAAGAAACTT CCTTAAAAAC GCCACGGTGC TTGCTGCCGC CGGAAGCAGC
CCAATAGCGA GTACCTGGTC AGCGGCTGCG CCCCAACAAA CCAAAAAGAT TGGAGTGCAG
ACCTATTCCA TCCGCCGGGA ATTAAAACAG GATATGGTCG GTTCGCTGAC GGCGCTGAAG
AAAATTGGTT TCTCCCATAT AGAGCTTTAT GGGTATGAAC AACAGAATAA GAAAGGCTCC
GTGTTGGGGT ATTCCCTGAA AGAGTACCGT AAGATCCTGT CAGACGTCGG TCTGGAGCCT
ACCAGTTCGC ATCTGGAACC CCCGTTGCAA AGTATTTACA AGTTTGGGGA TGGAGGGGGC
ACCGGCAAAG GTGAGCGGAG CATCCAGATT GAAGCCTATA CCAAACAGAA CATCCCGGCC
ATTATGGAGT TCTGGAAACG GGCCATTGCC GATCATCAGG AGTTGGGTAT TCCGGTGATG
GTTCAGCCAG CAATGCCCGT AGTCAACACA GTTGATGACG CCAAATTGGT TTGTGACATC
TTCAATCAAA CCGGCGAACT GGCCAAACAG GCTAACCTGC GGTGGGGTTA TCACAACCAT
AGCGCGGAGT TCAAACGGAT TGGCCTAAAA CGGGGTGAAG ATTGGTCTTC GGAAATGGCC
ATCACCCCTA CCTCTTATAC GAGTGAGATC TTTTATGACT TTCTGCTTAC GCATACCGAC
CCGGCCCTGG TCTTCTTCGA AATGGATGTG TACTGGGCCG TTATGGGCCA ATGCGACCCG
GTCAGTTATT TCAACCGCTA TCCCGGCCGT TTTCCGCTTT TGCATATCAA AGACCGGGAC
ATTCTGGGGT CAACCGGCTT TATGAACTTC GCCAGCATCT TCGAAGCCGG TTACAGCAAA
GGCGGTCTGG AGCGGTATTA CGTGGAGCTT GAATACCCTA ACCCGGCGGG TAGTACGTCG
CTTTCCCAAC TGGAGTCGGT GAAGCGGTCT TATGATTTTG TGGCAAATGC CGGGTTCGTG
AAATAG
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| Protein sequence | MLKRRNFLKN ATVLAAAGSS PIASTWSAAA PQQTKKIGVQ TYSIRRELKQ DMVGSLTALK
KIGFSHIELY GYEQQNKKGS VLGYSLKEYR KILSDVGLEP TSSHLEPPLQ SIYKFGDGGG
TGKGERSIQI EAYTKQNIPA IMEFWKRAIA DHQELGIPVM VQPAMPVVNT VDDAKLVCDI
FNQTGELAKQ ANLRWGYHNH SAEFKRIGLK RGEDWSSEMA ITPTSYTSEI FYDFLLTHTD
PALVFFEMDV YWAVMGQCDP VSYFNRYPGR FPLLHIKDRD ILGSTGFMNF ASIFEAGYSK
GGLERYYVEL EYPNPAGSTS LSQLESVKRS YDFVANAGFV K
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