Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Slin_0087 |
Symbol | |
ID | 8723815 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Spirosoma linguale DSM 74 |
Kingdom | Bacteria |
Replicon accession | NC_013730 |
Strand | + |
Start bp | 102985 |
End bp | 103866 |
Gene Length | 882 bp |
Protein Length | 293 aa |
Translation table | 11 |
GC content | 47% |
IMG OID | |
Product | hypothetical protein |
Protein accession | YP_003384959 |
Protein GI | 284035029 |
COG category | |
COG ID | |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 27 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 39 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | GTGCACTCAC TGGCTTTACT CATAGGCAAT GGTATAAATA ACCTCGTGCC CAACAATAGT TGGCAGGATT TGCTGGAGGA TATGGTTAGA TTTTGTAACG CGCAAGGGCT GGTAAATTAT CAGCAGATTA AGCCGTTTCC CCTGCTTTAC GAAGAGATTT TCCTGAAGTC GCTGCAGGTG TCCCGCCGGA AGGAGATTGA CCTGAAAACG TTCATTGCCC GGAAGGTTTC CCAGATTGAG CCCAATGAGC TTCATGAGCG TATTCGGAGC TTTGCTACGG ACGACATCAT CACAACTAAC TATGAGTTTT CTCTGGAAGG GCAGGTGCCG ACTAGAAACA TGGGTGTGAT CGATGAAAAG GTCTATAGCG TGTTCCGGCA TTATGAAGTG AAGTCGAAAC GATATTGGCA TATCCATGGC GACTGTCGGG TACCTAACAG CATCAACCTG GGCTTTGAGC ATTATGGCGG GCAACTCCAG CAAATGCGGA ATTATGTGGT CAGCGGGACC CATTATACAA GCCCGGGCCT GCCCAAACAT CCGTTCATTA AACGGCTGAA AACAAAGGAG TCAATGGGCT TATCCTGGAT TGACCTGTTC TTCACGACCG ACATATACAT TCTGGGCCTA ACCCTTGACT TTGTCGAAAC CGACCTGTGG TGGTTACTAA CCTACCGGGC CCGCCAGTTG TACTACCGCA GCAGATCCGA TATCACCAAT AAGATCGTTT ATTTTCTGCC AAAGGAGTAT AAGAATGACG CCCTGGTTAA GCTTGATTTT TTTGCCGCCA ACGGAGTTCA GGTCATCGAC TCTATATCCG GTGTCGATAA GCTAAAGTAC TATCATCAGG TACTTGATTA TATTGAGAAG GACGTTCGGT AA
|
Protein sequence | MHSLALLIGN GINNLVPNNS WQDLLEDMVR FCNAQGLVNY QQIKPFPLLY EEIFLKSLQV SRRKEIDLKT FIARKVSQIE PNELHERIRS FATDDIITTN YEFSLEGQVP TRNMGVIDEK VYSVFRHYEV KSKRYWHIHG DCRVPNSINL GFEHYGGQLQ QMRNYVVSGT HYTSPGLPKH PFIKRLKTKE SMGLSWIDLF FTTDIYILGL TLDFVETDLW WLLTYRARQL YYRSRSDITN KIVYFLPKEY KNDALVKLDF FAANGVQVID SISGVDKLKY YHQVLDYIEK DVR
|
| |