Gene Slin_0087 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSlin_0087 
Symbol 
ID8723815 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSpirosoma linguale DSM 74 
KingdomBacteria 
Replicon accessionNC_013730 
Strand
Start bp102985 
End bp103866 
Gene Length882 bp 
Protein Length293 aa 
Translation table11 
GC content47% 
IMG OID 
Producthypothetical protein 
Protein accessionYP_003384959 
Protein GI284035029 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones27 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones39 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGCACTCAC TGGCTTTACT CATAGGCAAT GGTATAAATA ACCTCGTGCC CAACAATAGT 
TGGCAGGATT TGCTGGAGGA TATGGTTAGA TTTTGTAACG CGCAAGGGCT GGTAAATTAT
CAGCAGATTA AGCCGTTTCC CCTGCTTTAC GAAGAGATTT TCCTGAAGTC GCTGCAGGTG
TCCCGCCGGA AGGAGATTGA CCTGAAAACG TTCATTGCCC GGAAGGTTTC CCAGATTGAG
CCCAATGAGC TTCATGAGCG TATTCGGAGC TTTGCTACGG ACGACATCAT CACAACTAAC
TATGAGTTTT CTCTGGAAGG GCAGGTGCCG ACTAGAAACA TGGGTGTGAT CGATGAAAAG
GTCTATAGCG TGTTCCGGCA TTATGAAGTG AAGTCGAAAC GATATTGGCA TATCCATGGC
GACTGTCGGG TACCTAACAG CATCAACCTG GGCTTTGAGC ATTATGGCGG GCAACTCCAG
CAAATGCGGA ATTATGTGGT CAGCGGGACC CATTATACAA GCCCGGGCCT GCCCAAACAT
CCGTTCATTA AACGGCTGAA AACAAAGGAG TCAATGGGCT TATCCTGGAT TGACCTGTTC
TTCACGACCG ACATATACAT TCTGGGCCTA ACCCTTGACT TTGTCGAAAC CGACCTGTGG
TGGTTACTAA CCTACCGGGC CCGCCAGTTG TACTACCGCA GCAGATCCGA TATCACCAAT
AAGATCGTTT ATTTTCTGCC AAAGGAGTAT AAGAATGACG CCCTGGTTAA GCTTGATTTT
TTTGCCGCCA ACGGAGTTCA GGTCATCGAC TCTATATCCG GTGTCGATAA GCTAAAGTAC
TATCATCAGG TACTTGATTA TATTGAGAAG GACGTTCGGT AA
 
Protein sequence
MHSLALLIGN GINNLVPNNS WQDLLEDMVR FCNAQGLVNY QQIKPFPLLY EEIFLKSLQV 
SRRKEIDLKT FIARKVSQIE PNELHERIRS FATDDIITTN YEFSLEGQVP TRNMGVIDEK
VYSVFRHYEV KSKRYWHIHG DCRVPNSINL GFEHYGGQLQ QMRNYVVSGT HYTSPGLPKH
PFIKRLKTKE SMGLSWIDLF FTTDIYILGL TLDFVETDLW WLLTYRARQL YYRSRSDITN
KIVYFLPKEY KNDALVKLDF FAANGVQVID SISGVDKLKY YHQVLDYIEK DVR