Gene Slin_0081 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSlin_0081 
Symbol 
ID8723809 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSpirosoma linguale DSM 74 
KingdomBacteria 
Replicon accessionNC_013730 
Strand
Start bp96568 
End bp97122 
Gene Length555 bp 
Protein Length184 aa 
Translation table11 
GC content55% 
IMG OID 
Producthypothetical protein 
Protein accessionYP_003384953 
Protein GI284035023 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value0.0519356 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones42 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAAGCCC TCGTCGCCCT CCTTCTGTTA GCGTCAGCCT GCACCAGCCA TCGGCCGGCC 
GCCATCAATG CGCCAGCTGA TGGCGCGGAG TACTACCAGC CTAACCAACC GGTATCGGTG
AGTATGCCCC GGCTTTACCC CGACCCGCAG GGTGGGCTTG GCCACTCACA GGACCCGGAT
ATCCGGGTGA CGGATATCCG ACTGACGGCC AGCTACACGG TGCTGTACAT GACTTTCGGG
AAAGACCCCA ACGACCGCAA TAACAACTAC TACGGCACCA GCAGCATCTC CTTCAATCCG
AAGGCCGTTC TGGCCTCGGC CGATGGCAAG AAAACGTATG CTCTGGTTAA AACGGAAGGC
ATCCCTATGT CGCCGGAAAC CCGCGACATC AAGAATGACG AAAAAATACC CTTTGTGCTG
TATTTCGAAC GGCTGGACAA GGGCGTCGAA TCCTTCGATT TATTTGAATG CAAGAGCGAT
AATCAGAATT CCTGCTTTAA CGTAGCCGGC ATGACCATTC AGAACCCGGC CAGTCCCGAA
GCCAAGCAAA ACTGA
 
Protein sequence
MKALVALLLL ASACTSHRPA AINAPADGAE YYQPNQPVSV SMPRLYPDPQ GGLGHSQDPD 
IRVTDIRLTA SYTVLYMTFG KDPNDRNNNY YGTSSISFNP KAVLASADGK KTYALVKTEG
IPMSPETRDI KNDEKIPFVL YFERLDKGVE SFDLFECKSD NQNSCFNVAG MTIQNPASPE
AKQN