Gene Slin_0080 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSlin_0080 
Symbol 
ID8723808 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSpirosoma linguale DSM 74 
KingdomBacteria 
Replicon accessionNC_013730 
Strand
Start bp95882 
End bp96397 
Gene Length516 bp 
Protein Length171 aa 
Translation table11 
GC content47% 
IMG OID 
Producthypothetical protein 
Protein accessionYP_003384952 
Protein GI284035022 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value0.366209 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones42 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTTTTCTT CTTCTTCGTC TAGTAGTACA ATCCGTGTTC TTTTGTTTAT CGCTGCCAGC 
TTATTTTACA GTCTCTTCGC CCTGGCTCAG ACCAATCTCA AGTACCGCTT ACTCACCGGT
TATCTACTAA ACAGTAACGC TACCCTTACC AAAGGAAAAC CCACTCTTTT CGTCTTCGAG
CAGGAGGATA CGTTCAAGCA GGTGTTTCAG CAAGCGACAA ATACAGGCAA ACGCAAAGCT
GACGCCCCTA ATTTCGATCG GGAAATGGCT ATTGGAATCG CCCTGGCTCC TACAAAAACG
CCCCCAAAAC TTTCGGTTAG CCGCGTGTTC GTACAAGATT CAACGCTTAC GGTGCGGTAC
ATTCGTATGG TAGATACCAC CGTTACCAAA TCTCCCTTAC AATCGCCTGC TCAGCCCATG
CTGTTGCTTA GCATCCCGAA GCAAACTGTG CTGAGGACCC GGCTCGTTGA AAACGGAAAA
GTTGTGCAAA ACATAAAGAA GCGCGATACA AACTAA
 
Protein sequence
MFSSSSSSST IRVLLFIAAS LFYSLFALAQ TNLKYRLLTG YLLNSNATLT KGKPTLFVFE 
QEDTFKQVFQ QATNTGKRKA DAPNFDREMA IGIALAPTKT PPKLSVSRVF VQDSTLTVRY
IRMVDTTVTK SPLQSPAQPM LLLSIPKQTV LRTRLVENGK VVQNIKKRDT N