Gene Slin_0079 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSlin_0079 
Symbol 
ID8723807 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSpirosoma linguale DSM 74 
KingdomBacteria 
Replicon accessionNC_013730 
Strand
Start bp94832 
End bp95314 
Gene Length483 bp 
Protein Length160 aa 
Translation table11 
GC content50% 
IMG OID 
Productprotein of unknown function DUF1452 
Protein accessionYP_003384951 
Protein GI284035021 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones21 
Plasmid unclonability p-value0.469341 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones44 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGAAACTC AACCCTCAAC ACCTGCCAGC AAAGGCTTTT TAGAACGTTT TTCTTCAGCT 
GTCGCGAGAG CTACGGGCAG CTCAGCAGCT TTCCTGCTGG CCCTGGCCAC GGTCATCATC
TGGGCCTTGA GCGGCCCTAT TTTCGGCTAC TCAGAAGACT GGCAACTGGT CATCAATACC
GGTACAACCA TTATTACCTT TCTGATGGTG TTTTTAATTC AGAAGGCGCA AAATAAGGAG
TCGATGTCGG TTCAATTGAA ACTCAATGAA CTCATAGCCG CAACCAAAGG AGCCAGTAAC
CGGCTGGTAT CGGTTGAGAA CCTGACCGAA GAGGAACTGG CCGTCTTGCA ACAGCACTAC
CAGACGATGG CAGAAATCAC CAAAAAAGCA TCTGATCTGC GCCAGTCGCA CTCCGTTGAA
GAAGCCATTA AAGATGCGTC TGAAAAGCTG GAGGATGAGT CGGGAACAGG CCATACCTTG
TAA
 
Protein sequence
METQPSTPAS KGFLERFSSA VARATGSSAA FLLALATVII WALSGPIFGY SEDWQLVINT 
GTTIITFLMV FLIQKAQNKE SMSVQLKLNE LIAATKGASN RLVSVENLTE EELAVLQQHY
QTMAEITKKA SDLRQSHSVE EAIKDASEKL EDESGTGHTL