Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Slin_0078 |
Symbol | |
ID | 8723806 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Spirosoma linguale DSM 74 |
Kingdom | Bacteria |
Replicon accession | NC_013730 |
Strand | + |
Start bp | 94083 |
End bp | 94808 |
Gene Length | 726 bp |
Protein Length | 241 aa |
Translation table | 11 |
GC content | 54% |
IMG OID | |
Product | protein of unknown function DUF72 |
Protein accession | YP_003384950 |
Protein GI | 284035020 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 20 |
Plasmid unclonability p-value | 0.483229 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 44 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGGCGTTT ACATTGGTAC ATCGGGCTGG AGTTATGACC ATTGGCAGGG CGTCTTGTAC CCGAACCCAA CCCCCGTGGC CAAACGGCTG GGGTATTACA TACAGAAATT CCAGACGGTT GAACTCAACA GCAGTTTCTA CCGATGGCCC AAACAGACTA CGTTCACCGG CTGGGAACAG CGCCTGCCAG ACGGTTTTTT GCTGACAGTG AAAGCACCCC GAGGGCTGAC CCACGCCAAA AAGCTGTACC AGCCGGAAGT TTGGATGGAG CGCATCAAAA CCTGCTGGCA TGAACTAAAA CAGAAACGGG CCGTTCTGCT GGTGCAACTG GCCCCTCAGC AGGCGTATGA TTACGACCGG TTGGCGTACT TTCTGGATCA GATTCCGCCC TGGCTGCATA CCACCGTTGA GTTCCGGCAT CCAAGCTGGA ACAACGAAGC TGTTTTTTCT CTCCTTGAGC AGCACCAGGT CGCGTATTGC ATTATGAGCG GTGCCCGGCT GCCCTGTATT TTGCGCGTGA CGGCCCCGTT TGTATACGTG CGTATGCATG GACCCGATAC CGAGCATTTG TACGGCGGCT CCTATTCCGA TGCCGATTTG CATTGGTGGG CCAGCCGAAT TAGGGAATGG GCAGATATGG GAAAAGATGT GTTCGTTTAT TTCAATAACG ATGGCGGAGG CAACGCCGTG CGCAATGCCC TGGCGTTACA GCAACTGGTT GGGTAA
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Protein sequence | MGVYIGTSGW SYDHWQGVLY PNPTPVAKRL GYYIQKFQTV ELNSSFYRWP KQTTFTGWEQ RLPDGFLLTV KAPRGLTHAK KLYQPEVWME RIKTCWHELK QKRAVLLVQL APQQAYDYDR LAYFLDQIPP WLHTTVEFRH PSWNNEAVFS LLEQHQVAYC IMSGARLPCI LRVTAPFVYV RMHGPDTEHL YGGSYSDADL HWWASRIREW ADMGKDVFVY FNNDGGGNAV RNALALQQLV G
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