Gene Slin_0078 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSlin_0078 
Symbol 
ID8723806 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSpirosoma linguale DSM 74 
KingdomBacteria 
Replicon accessionNC_013730 
Strand
Start bp94083 
End bp94808 
Gene Length726 bp 
Protein Length241 aa 
Translation table11 
GC content54% 
IMG OID 
Productprotein of unknown function DUF72 
Protein accessionYP_003384950 
Protein GI284035020 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value0.483229 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones44 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGGCGTTT ACATTGGTAC ATCGGGCTGG AGTTATGACC ATTGGCAGGG CGTCTTGTAC 
CCGAACCCAA CCCCCGTGGC CAAACGGCTG GGGTATTACA TACAGAAATT CCAGACGGTT
GAACTCAACA GCAGTTTCTA CCGATGGCCC AAACAGACTA CGTTCACCGG CTGGGAACAG
CGCCTGCCAG ACGGTTTTTT GCTGACAGTG AAAGCACCCC GAGGGCTGAC CCACGCCAAA
AAGCTGTACC AGCCGGAAGT TTGGATGGAG CGCATCAAAA CCTGCTGGCA TGAACTAAAA
CAGAAACGGG CCGTTCTGCT GGTGCAACTG GCCCCTCAGC AGGCGTATGA TTACGACCGG
TTGGCGTACT TTCTGGATCA GATTCCGCCC TGGCTGCATA CCACCGTTGA GTTCCGGCAT
CCAAGCTGGA ACAACGAAGC TGTTTTTTCT CTCCTTGAGC AGCACCAGGT CGCGTATTGC
ATTATGAGCG GTGCCCGGCT GCCCTGTATT TTGCGCGTGA CGGCCCCGTT TGTATACGTG
CGTATGCATG GACCCGATAC CGAGCATTTG TACGGCGGCT CCTATTCCGA TGCCGATTTG
CATTGGTGGG CCAGCCGAAT TAGGGAATGG GCAGATATGG GAAAAGATGT GTTCGTTTAT
TTCAATAACG ATGGCGGAGG CAACGCCGTG CGCAATGCCC TGGCGTTACA GCAACTGGTT
GGGTAA
 
Protein sequence
MGVYIGTSGW SYDHWQGVLY PNPTPVAKRL GYYIQKFQTV ELNSSFYRWP KQTTFTGWEQ 
RLPDGFLLTV KAPRGLTHAK KLYQPEVWME RIKTCWHELK QKRAVLLVQL APQQAYDYDR
LAYFLDQIPP WLHTTVEFRH PSWNNEAVFS LLEQHQVAYC IMSGARLPCI LRVTAPFVYV
RMHGPDTEHL YGGSYSDADL HWWASRIREW ADMGKDVFVY FNNDGGGNAV RNALALQQLV
G