Gene Slin_0072 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSlin_0072 
Symbol 
ID8723800 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSpirosoma linguale DSM 74 
KingdomBacteria 
Replicon accessionNC_013730 
Strand
Start bp89460 
End bp89924 
Gene Length465 bp 
Protein Length154 aa 
Translation table11 
GC content50% 
IMG OID 
ProductRNA polymerase, sigma-24 subunit, ECF subfamily 
Protein accessionYP_003384944 
Protein GI284035014 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones25 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones42 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
TTGACCCTTC AGGACGAGTT TATCGAACAG ATACAGAAAC ACCAGGCGTT ACTCAACAAA 
CTGGTGTTTC TGTATGCTGA TCAGACCGAA GATCGGCACG ATCTGCGTCA GGAGATTTTA
CTCCAGGCGT GGCGGTCGTA TGCTACGTTT CGGGGCGACG CTAAATTCTC GACCTGGCTG
TATCGAGTTG GGTTGAATGT ATCCCTGACC CGGCTCAATG ACCGAAAACG ACAACCATCG
GCGGAGTTAG ACGACACCAT GGAGGGTGGT CCCGCTACGT TTGAGTCCGA CGATCAGCTT
CGGTTTATAC TCCAGCAGTT CAACACCCTT GACAGAACCC TATTGGTGAT GAGTATGGAC
GGCTACACAA ACGACGAAAT CGCCGAATCA ATGGGGATTA GTGCCGGTAA TGTGCGCACC
AAACTGCATC GACTTCGACA GAAAATTGAC AAAATATGGA TCTGA
 
Protein sequence
MTLQDEFIEQ IQKHQALLNK LVFLYADQTE DRHDLRQEIL LQAWRSYATF RGDAKFSTWL 
YRVGLNVSLT RLNDRKRQPS AELDDTMEGG PATFESDDQL RFILQQFNTL DRTLLVMSMD
GYTNDEIAES MGISAGNVRT KLHRLRQKID KIWI