Gene Slin_0070 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSlin_0070 
Symbol 
ID8723798 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSpirosoma linguale DSM 74 
KingdomBacteria 
Replicon accessionNC_013730 
Strand
Start bp88095 
End bp89051 
Gene Length957 bp 
Protein Length318 aa 
Translation table11 
GC content60% 
IMG OID 
Product3-hydroxyacyl-CoA dehydrogenase NAD-binding protein 
Protein accessionYP_003384942 
Protein GI284035012 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones27 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones40 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGATCGATT CTACTACGTC ACCGCGTCTT ACAACCGGCA TTCTGGGCAG TGGGCAAATT 
GGAGCGGCAT CCGCAGTGTT AGCGGCCCGG GCGGGGCATC AGGTGCTGCT CTGGACACGC
TCTGCCCATA AACAGGCCGC TATTTCGGCC GAATTAAGTA AACTGTCGGC CTTTTGTGAG
GAGCATATGG GCGAGCCGAA GCAGCCTCTT GGTGCTATCC AGATCGTTAC CGACCTGAGT
CTGGTAGAGG CCGAAAGCGA TGTGCTGCTG GAGTGTATTA TCGAAGATAT GGACGAAAAG
GTGGCCTTGC TGAGCCACCT GACGGCCTGT GTTAATCAGG ATAAGCTGGT GTTATCGGCC
ACGAGCGGAC TGTCCATTAC AGACATGGCA CGGCGGAGTG GCCTGGAGAA GGTGCTCGTG
GGGGCACACT TCTGGAACCC GCCTTACCTG ATTCCGATTG TGGAAGTCAT CGCCGGAGAA
GCCACGCCCC CGCAAAAGGT CGAACAGGCC TGCGCCTGGC TCGACGCCCT GGGCAAGCGG
CCCATTCGCT GCCCGGACAT TCCCGGTTTC ATCGGCAATC GGCTCATGCA CGCCCTTTGG
CGGGAAGCCC TCGCGCTGGT CGACGCCGGG GCCTGCTCGC CCGCCGACAT TGACGCCATT
GTCAAGTACA CTTTCGCGCT GCGACTACCC GCACTCGGCC CGATGGAAAA CATGGATCTG
GTTGGGCTTG ATCTGGTGAA CCGGGTGCAG ACCTACCTAC TGCCCGATCT GGCCACGAAC
GCCATACCAG CCGATTCGCT GCGAAACCGA CTGGCGGCTG GCCAAACGGG TATGACCGCC
GGACAGGGGT TCTATGACTG GCGGGTACGG GATGCTACCG AGGTGGTCCG GCAACGCGAT
CTGACCATTC TGCACCTATT GCGCATGCTG GGCGAACTCC CGGAAAAAAC GACTTGA
 
Protein sequence
MIDSTTSPRL TTGILGSGQI GAASAVLAAR AGHQVLLWTR SAHKQAAISA ELSKLSAFCE 
EHMGEPKQPL GAIQIVTDLS LVEAESDVLL ECIIEDMDEK VALLSHLTAC VNQDKLVLSA
TSGLSITDMA RRSGLEKVLV GAHFWNPPYL IPIVEVIAGE ATPPQKVEQA CAWLDALGKR
PIRCPDIPGF IGNRLMHALW REALALVDAG ACSPADIDAI VKYTFALRLP ALGPMENMDL
VGLDLVNRVQ TYLLPDLATN AIPADSLRNR LAAGQTGMTA GQGFYDWRVR DATEVVRQRD
LTILHLLRML GELPEKTT