Gene Slin_0067 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSlin_0067 
Symbol 
ID8723795 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSpirosoma linguale DSM 74 
KingdomBacteria 
Replicon accessionNC_013730 
Strand
Start bp84266 
End bp85390 
Gene Length1125 bp 
Protein Length374 aa 
Translation table11 
GC content53% 
IMG OID 
ProductOsmosensitive K channel His kinase sensor 
Protein accessionYP_003384939 
Protein GI284035009 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones28 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones37 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAACCCAA ACGACCAGAA CGCCGAACAT TTTCTGGATC TCCTCCGTCA GTCCCGGCGG 
GGTAAGTTCA AGGTGTATAT CGGGATGAGT GCAGGCGTCG GTAAATCATA CCGGATGCTT
CAGGAAGCCC ATACCCTGCT GCGGGCCGGT ATCGACGTGA AAATCGGGTT TATTGAAACG
CATAACCGGA CCGAAACCCA GGCGCTGGTG GATGGGCTCC CCGTTATTCC CCGGCGACGG
TTGTTTTACA AAGGGCGCGA GCTGGATGAA CTCGACTTAC AGGCCATTCT CAACCTGCAT
CCTGAACTGG TGATTGTCGA TGAACTGGCG CATACCAATA TTCCCGGCTC GAAAAACGAA
AAACGCTGGC AGGACGTAGT CGAAATTGTG GAAGCCGGTA TCAACGTCAT CAGTGCCGTT
AACATTCAGC ATATCGAAAG TTTGTATCAG GCCGTTCGTG CCATTACGGG CATCGACGTA
ACCGAACGCG TACCGGACCG GGTTCTTCAA ATGGCTGACG AAGTGGTGAA CATCGACCTC
ACCGCCGACG AACTCATTAC GCGGCTCAAA GACGGGAAGA TTTATGATAC AGCGAAGGTC
AGCACGGCAT TGAACAACTT CTTTCAGCCA GAGCGAATCT TGCAGCTGCG CGAACTGGCC
CTGCGCGAAG TGGCCACGGC GGTAGAGCGA AAAATTGAAA CGTCGGTGCC AACCAGCGTT
AAGGCGAAGC CTGAGCGATT CCTGGCCGCC ATCAGTTCCA ATCACGAAAT TGCCCGGCGG
GTCATTCGCA AAACGGCGCG GCTGGCGGCT TATTACAACT CGCGCTGGTT TGTGCTCTAT
GTGCAGACCC CTGCCGAAAG CTCCGACCGT ATTAAACTCG ATGTCCAGCG CCACCTCATC
AATAACCTCA AACTGGCTAC GGAGCTGGGT GCGGAGGTTA TTAGGGTTAA GGATAGTAAT
ATTGTGAACA GCATCATGGC CGAAGTGGAG AAACGGAACA TCACGACGGT TTGCATTGGA
AAGCCACATC TTACGCTGAT TCAGATTATT CTGAGAACCA ATGCCTTTAA CCAGCTTCTT
ACCAAACTGT CGGGGTCGGA TACGGATTTG ATTATACTCT CGTAG
 
Protein sequence
MNPNDQNAEH FLDLLRQSRR GKFKVYIGMS AGVGKSYRML QEAHTLLRAG IDVKIGFIET 
HNRTETQALV DGLPVIPRRR LFYKGRELDE LDLQAILNLH PELVIVDELA HTNIPGSKNE
KRWQDVVEIV EAGINVISAV NIQHIESLYQ AVRAITGIDV TERVPDRVLQ MADEVVNIDL
TADELITRLK DGKIYDTAKV STALNNFFQP ERILQLRELA LREVATAVER KIETSVPTSV
KAKPERFLAA ISSNHEIARR VIRKTARLAA YYNSRWFVLY VQTPAESSDR IKLDVQRHLI
NNLKLATELG AEVIRVKDSN IVNSIMAEVE KRNITTVCIG KPHLTLIQII LRTNAFNQLL
TKLSGSDTDL IILS