Gene Slin_0061 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSlin_0061 
Symbol 
ID8723789 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSpirosoma linguale DSM 74 
KingdomBacteria 
Replicon accessionNC_013730 
Strand
Start bp75252 
End bp77219 
Gene Length1968 bp 
Protein Length655 aa 
Translation table11 
GC content53% 
IMG OID 
ProductK potassium transporter 
Protein accessionYP_003384933 
Protein GI284035003 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones28 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones31 
Fosmid unclonability p-value0.685026 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTCGTCAT CTCATTCGTC GTTAAATAAA GTATCACCAC AGGGCCTGTT AGTGGCCATT 
GGCATTGTTT TCGGTGATAT TGGAACGTCG CCCCTCTATA CACTGGCGGC CGTTATGCGC
GGCAAAGAGC TAACCGAAAC GCTGGTGCTG GGAACACTGT CCTGCGTCAT CTGGACGCTG
ACCCTGCAAA CAACCATAAA GTATGTCGTA ATCACACTCC GGGCAGACAA CAAGGGAGAG
GGAGGCATTT TCTCACTGTA TACACTCGTC CGGCGATTCA CAGGCGGCTG GTTGAAGTAC
CCGGCTATTA TCGGCGGCTC GTTTCTGCTG GCTGATGGAC TGATTACGCC CCCCATCTCG
GTATCCTCGG CTATCGAGGG ACTGCTTATT TTCTATCCCC ATCTGGACAC GGTTCCCATC
GTTATCGCCA TTCTGATCGC TCTTTTTGTG AGTCAGCAAT TTGGTACGCA GTTTCTGGGT
AAGCTGTTCG GCCCCATTAT GCTGATCTGG TTCTCGTTCA TTGGTGCCAT TGGTTTCTGG
GCACTTTTTG GACATCTGGG TGTATTGAGA GCATTAAACC CGGCCTGGGC CATACGGTTG
CTAACGGTAT ATCCGGGTGG TTTCTGGCTG CTGGGCGGGG TATTTTTATG CACCACCGGG
GCCGAAGCCC TGTACTCGGA TATGGGTCAC TGCGGACGGG GCAATATCCG GGTGAGTTGG
GGCTATGTTA AACTAATGCT GCTGCTGTCC TACGCGGGTC AGTCGGCCTG GCTGATGCAG
CACCTCGGTC AGCGGCTGAG CGAAACGAGT CCATTTTATT CCATCGTTCC GGCCTGGTTA
ACTGTCTTCA GCATCGGGCT GGCTACGGTG GCCACGATTA TTGCCAGTCA GGCCCTCATC
AGCGGGGCGT TTACGCTCGT AGGCGAAGCC ATGCGGCTCA ACTTCTGGCC CCGCCAGCGC
GTTGTTTACC CATCTTCCGA ACGCGGGCAG TTGTATGTTC CCTACGTAAA CTGGGGCCTG
ATGGTCGGGT GTATTCTGAT CGTACTGCAC TTCCGCGAAT CGAAAAACAT GGAAGCGGCT
TTTGGCTTGG CCGTTACGCT CACGATGCTC ATGAGCACCG TCTTGATGAG CATGTTTCTG
CGCGTAAAGC GGGTCAATCC GATATTGATC GTGCTGATTA CGGGTGTTTT TCTGACGGTG
GAAAGCACGT TTCTGATCGC TAATCTGGTC AAATTTGAGG AGGGCGGCTG GATATCCATT
ACGCTGGGCC TGTTGCTGAT GGCACTGATG TTTTTCTGGT ACCGGGGCGA AGCCATCAAA
GCGGAGTCGA TTCGCTACGA TTCCCTACCC GACAACTTAC ACCTGCTGAA ACAACTGAGC
ATCGATGAGT CGATTCCGAA ATACGCGACC CATCTGGTAT ACCTGACCAC GGCCGAGGAC
ACCCGAAAAA TCGAAGCCGA AACGCTCTAT TCCATTTTGA ACCGCGCCCC CAAGCGAGCC
GACATTTACT GGCTTCTGCA TATTTGCGTA GAAGACGAGC CGTATGTGAT GCGCTACAAA
GTAGAAACGC TGGCCGAAGA AGATGTGTAT TTCATTACGT TCTACCTTGG CTTCCGGGTA
CAGCCGCGCA TCAATTTACT CTTCAGGATG GTGGTGGAAG ACATGGTGAA AAACAAGGAA
ATAACCCTCG AAACCCGATA CCGGTCGCTG AACACCCACC GCGTGCCGGG CGATTTCCGG
TTTGTGCTTT TTCGGACATT TCTCTCCTAC GAAAACGCCC TGTCTGTCAG CGATAAACTG
ATTATGAATG TCTATTTTCT CATCAAAAAT ATCTCGCTGC CTCCGCAGGC GGCTTATGGA
CTGGATACCA GCAACGTAGT AGTCGAAGAT GTGCCTATCG TGCTGGCACG TCCCGCCAAC
CTGCGATTAA CGCGGATAAA GCCAAAAGAG GAACCCTATA CCGGATAA
 
Protein sequence
MSSSHSSLNK VSPQGLLVAI GIVFGDIGTS PLYTLAAVMR GKELTETLVL GTLSCVIWTL 
TLQTTIKYVV ITLRADNKGE GGIFSLYTLV RRFTGGWLKY PAIIGGSFLL ADGLITPPIS
VSSAIEGLLI FYPHLDTVPI VIAILIALFV SQQFGTQFLG KLFGPIMLIW FSFIGAIGFW
ALFGHLGVLR ALNPAWAIRL LTVYPGGFWL LGGVFLCTTG AEALYSDMGH CGRGNIRVSW
GYVKLMLLLS YAGQSAWLMQ HLGQRLSETS PFYSIVPAWL TVFSIGLATV ATIIASQALI
SGAFTLVGEA MRLNFWPRQR VVYPSSERGQ LYVPYVNWGL MVGCILIVLH FRESKNMEAA
FGLAVTLTML MSTVLMSMFL RVKRVNPILI VLITGVFLTV ESTFLIANLV KFEEGGWISI
TLGLLLMALM FFWYRGEAIK AESIRYDSLP DNLHLLKQLS IDESIPKYAT HLVYLTTAED
TRKIEAETLY SILNRAPKRA DIYWLLHICV EDEPYVMRYK VETLAEEDVY FITFYLGFRV
QPRINLLFRM VVEDMVKNKE ITLETRYRSL NTHRVPGDFR FVLFRTFLSY ENALSVSDKL
IMNVYFLIKN ISLPPQAAYG LDTSNVVVED VPIVLARPAN LRLTRIKPKE EPYTG