Gene Slin_0058 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSlin_0058 
Symbol 
ID8723786 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSpirosoma linguale DSM 74 
KingdomBacteria 
Replicon accessionNC_013730 
Strand
Start bp69864 
End bp71945 
Gene Length2082 bp 
Protein Length693 aa 
Translation table11 
GC content56% 
IMG OID 
ProductGlycoside hydrolase 97 
Protein accessionYP_003384930 
Protein GI284035000 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones30 
Fosmid unclonability p-value0.52966 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCGTTTTT TTACGAAAAA ATACCTGGCT GCTTTGCTCA GTTTTGTCTG GGTCAGTGGC 
TTTGCTCAAC AGCCCATTTC CGTAAGTTCG CCGAACCGGT CCATTGTCGT TACGGCCCAA
AACACGCCCA CGGGCGAGGT GACGTATCAG GTTCGGTACA AAGGCAAATC CGTTATTGAG
CCGTCGGGCC TGGGCTTCGT GCTGAGCAAG CCTGCCGTGT CGTTGAAGCA GTTTACGATT
ACCCGTGTCG ATTCGTCGCG GACGGACGAA ACCTGGAAAC CGGTTTGGGG CGAGGTGAGC
CAGATTCGCA ATCACTACCA CGAACTTATC CTCAACCTTC AGGATAAATC CGGGTCGGGT
ATTGGCCTGC GAGTGCGCTT CCGGGTGTTC GACGACGGCG TTGGCTTTCG CTATGAATTC
CCGAAGCAGC CTAAGCTGAC CCATTTTGTG GTCGATGATG AGAAGACCCA GTTCAAGCTA
GCCGCCGACC ATCAGACGTT CTGGATGCCG GGCGATTATG ACTCGAACGA ATATTTCTAC
AACAAGACCA AACTGACCGA GGTCGACGCG ATTGCAGCTG CGGATAAGGA AAAAGACATC
GCCCTGAAGT CGGTGATCGG GCCGAATGCC GTGCAAACGC CGTTGCTGTT CAAGACCAGT
GACGGCCTGT ATGTGAGCCT CTACGAAGCG GCTTTGCTCA ATTACCCGGT CATGCATTTG
CAGCTGGACA AGAAAACCCT GACGCTTACG GCGCAGCTCA CGCCCGATGC GGTGGGCAAC
AAGGCGTATT TGCAAACACC TGCTCAAACG CCTTGGCGGA CCCTCATCAT CAGCGATAAA
GCCACCGACA TTCTGGCGTC CAAACTCATT CTGAACCTGA ACGAACCGTC GGCCATTGCC
GACCCATCGT GGATAAAGCC GCAGAAATTT GTGGGGATGT GGTGGGAGAT GCACATCGGC
AAGGCGAACT GGGCCAAAGC CGAAGGGAAG CACGGAGCCA ACACCCAGAA TGTGAAGAAA
TACATCGACT TTGCCGCCAA ATACGGTTTC AACGGTGTGC TGGTGGAAGG CTGGAATGAG
GGTTGGGAAG ACTGGTTTGG CAACTGGAAA GAGGATGTGT TCGATTTCGT GACGCCCTAT
CCCGATTACA ACATCGACTC CCTGACGACC TACGCCCAGC AGAAAGGCGT TCGGCTGATT
ATGCACCACG AAACGTCCGG CTCGGTCACG AACTATGAAC GCCGGATGGA TGCCGCGTTT
CAGTACATGG TGAAAGAGGG CATCAACACC GTGAAGACGG GCTACGTGGG CCGGATCATT
CCGCGTGGCG AACACCACGA CAGCCAGTGG ATGATTAACC ACTACCAACG GGTGGCGCAG
AAAGCGGCTC AATACAAGAT CATGGTCGAC TCGCACGAGT CGGCGCATCC GACGGGCCTG
CACCGGACCT ACCCGAACTG GATGGCGAGT GAAGCCGCCC GGGGCAGCGA ATTTAACAAC
GCGCCCACGC TGGGCATCAC GCCCGAACAC ACGACCATTT TGCCGTTTAC GCGAATGCTG
GGTGGCCCGA TGGACTTCAC CCCCGGCCTG TTCCGCTTCA AGCTCAACCA GTTCGACAGC
ACCCGCACCA CCGTTGTTCG GACTACGCTC GCCAAGCAAC TGGCGCTGTA CATTACGCTC
TACAGCCCGC TGCAAATGGC CGCCGACTTA CCCGAAAACT ACGAGAAGCA TCTGGATGCG
TTTCAGTTTA TCCGCGACGT GCCCGTCGAT TGGGACGACA CCAAAGTACT GGCCGCCGAA
CCCGCCGATT ACGTCATGAT TGCCCGCAAG GAAAAGGGAG CCGCCAACTG GTACGTTGGG
GCCATCACCG ACGAAAACAG CCGCGACCTA CCCCTGGATT TGTCGTTCCT CGAACCCGGC
AAAACCTACG ACGCCGTCTT CTACCGCGAC GCCCCCACCG CCGACTGGGC CACCAACCCC
GAAGCCTATG TCATCGAAAA GAAACCCGTT ACCGCTAAAA CCAAACTGAC GTTGCATTTG
GCGAAAGGGG GCGGGTGTGC AATTCAGTTT GTAAGGCGAT AG
 
Protein sequence
MRFFTKKYLA ALLSFVWVSG FAQQPISVSS PNRSIVVTAQ NTPTGEVTYQ VRYKGKSVIE 
PSGLGFVLSK PAVSLKQFTI TRVDSSRTDE TWKPVWGEVS QIRNHYHELI LNLQDKSGSG
IGLRVRFRVF DDGVGFRYEF PKQPKLTHFV VDDEKTQFKL AADHQTFWMP GDYDSNEYFY
NKTKLTEVDA IAAADKEKDI ALKSVIGPNA VQTPLLFKTS DGLYVSLYEA ALLNYPVMHL
QLDKKTLTLT AQLTPDAVGN KAYLQTPAQT PWRTLIISDK ATDILASKLI LNLNEPSAIA
DPSWIKPQKF VGMWWEMHIG KANWAKAEGK HGANTQNVKK YIDFAAKYGF NGVLVEGWNE
GWEDWFGNWK EDVFDFVTPY PDYNIDSLTT YAQQKGVRLI MHHETSGSVT NYERRMDAAF
QYMVKEGINT VKTGYVGRII PRGEHHDSQW MINHYQRVAQ KAAQYKIMVD SHESAHPTGL
HRTYPNWMAS EAARGSEFNN APTLGITPEH TTILPFTRML GGPMDFTPGL FRFKLNQFDS
TRTTVVRTTL AKQLALYITL YSPLQMAADL PENYEKHLDA FQFIRDVPVD WDDTKVLAAE
PADYVMIARK EKGAANWYVG AITDENSRDL PLDLSFLEPG KTYDAVFYRD APTADWATNP
EAYVIEKKPV TAKTKLTLHL AKGGGCAIQF VRR