Gene Slin_0056 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSlin_0056 
Symbol 
ID8723784 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSpirosoma linguale DSM 74 
KingdomBacteria 
Replicon accessionNC_013730 
Strand
Start bp68211 
End bp68684 
Gene Length474 bp 
Protein Length157 aa 
Translation table11 
GC content33% 
IMG OID 
Producthypothetical protein 
Protein accessionYP_003384928 
Protein GI284034998 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value0.305512 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones28 
Fosmid unclonability p-value0.187529 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAATCTGC GAATTCTTTC CCATCAACAA CGATTAGACA GTCTATATGC TAAAGTTGCT 
CTTGTAACTA CTCCACAAGA GCAAATGGAG TGGTCTAAGT ACTTATGTGT GTTGACAGCT
GGTTATATTG AAGAATCATT GAGAGTTCTT ATACTAGAAC ATGCCAAAAA TAACTCTTCA
ACAAAAATTC AGCGGTTTAT AGAAAAAGAG ATTTCATATG TTACAAATTG CAAAACAGAG
AGAATTCTGG AAGTTCTAAA TAAATTTGAC CCTAAATGGA GTACCACATT TGAATCTGAA
ATCAATAATA ATAGCCCTAT TGACAAAGAA ATAAAAGACA GCATTGATAG CATTGTCAGT
AATCGCCATT TAATAGCACA TGGCAAATCA GTTGGCATGA CTTATACAAC TATAAAAAGA
TATTACGGGT ATTGCAAAAT CGCTATTCAA ATACTTGAAA ATACAGTTAT GTGA
 
Protein sequence
MNLRILSHQQ RLDSLYAKVA LVTTPQEQME WSKYLCVLTA GYIEESLRVL ILEHAKNNSS 
TKIQRFIEKE ISYVTNCKTE RILEVLNKFD PKWSTTFESE INNNSPIDKE IKDSIDSIVS
NRHLIAHGKS VGMTYTTIKR YYGYCKIAIQ ILENTVM