Gene Slin_0055 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSlin_0055 
Symbol 
ID8723783 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSpirosoma linguale DSM 74 
KingdomBacteria 
Replicon accessionNC_013730 
Strand
Start bp67144 
End bp68046 
Gene Length903 bp 
Protein Length300 aa 
Translation table11 
GC content32% 
IMG OID 
Producthypothetical protein 
Protein accessionYP_003384927 
Protein GI284034997 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value0.128014 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones28 
Fosmid unclonability p-value0.217775 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACTCATA ATCATAGAAT AGACATTACT GACTTTTGCG ATTCTTACAA TCCAATCGTA 
AAATCTTATG CCGTCGAATT TTTAAGCAAG ATTATGTCTT TAGAGGACAT CAGGACTTTA
TTGTTCAATG ACGTTAATAC GAAAACGACA AAGGAAATAA TTGATTTTGC AGACCAGAGT
TCAGACAACT ACCTTAGTTC ATTTATCTAT AGGCTAGTTG GAGTAAAAGA AATTATTTTT
TGTAGGGAAA ATAGAGCTCA ACTTGACACA AATGAAGTTT GGAAGTTGAT ATCAAAATCA
ATTAGGGTTA TCCCATCAGG ACTTACTATA TCATCAATTG GTTCACAAGG ATTTTTATCA
ATACCGCTAT ACAAACAAGA CGCTTCGCTT GGAAATTTTG ATTTTATAAG ACTTCACATT
TGGGATGATT CGCTTGATGA ATATATGGAT ATGAAGAAAT GCTTAGATTT TTCAATTCAT
TCCCATACAT TCTTTGCAAA AAGTTGGATT ATTATCGGCA AAGTAAAAAA TGACAGATAT
GAATATAAAA TAGATTCAAA TGGGACACAT TCTTTCTTTG AAGTTCAGTA TAACAAGTCT
TTAAATGAAG TTAATCAGCA TACTTCTAAA GCTGTAAATA AAAATATTAA CGCTATACTT
TTTAAAACTA GCGAGGAAAC TCATTTCTCT AAAGGAAATT ATGAAATTGA ACCGAGTAAA
CTGCATCAAT CGGGTCATTT AAATTCACCT AATCCATCAG CCACATTTTT CTCTTTCACT
GGAAAAGACG GTTTAGGAGA GTCTTTTGTA ATAGGCCCGA AAGATATTGC TGAGTCTGAA
ATTAACAGGA AGATGAATAT TTCGCCAATT TACCTACTTG ATAAAATTGA TACACAAATA
TGA
 
Protein sequence
MTHNHRIDIT DFCDSYNPIV KSYAVEFLSK IMSLEDIRTL LFNDVNTKTT KEIIDFADQS 
SDNYLSSFIY RLVGVKEIIF CRENRAQLDT NEVWKLISKS IRVIPSGLTI SSIGSQGFLS
IPLYKQDASL GNFDFIRLHI WDDSLDEYMD MKKCLDFSIH SHTFFAKSWI IIGKVKNDRY
EYKIDSNGTH SFFEVQYNKS LNEVNQHTSK AVNKNINAIL FKTSEETHFS KGNYEIEPSK
LHQSGHLNSP NPSATFFSFT GKDGLGESFV IGPKDIAESE INRKMNISPI YLLDKIDTQI