Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Slin_0055 |
Symbol | |
ID | 8723783 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Spirosoma linguale DSM 74 |
Kingdom | Bacteria |
Replicon accession | NC_013730 |
Strand | - |
Start bp | 67144 |
End bp | 68046 |
Gene Length | 903 bp |
Protein Length | 300 aa |
Translation table | 11 |
GC content | 32% |
IMG OID | |
Product | hypothetical protein |
Protein accession | YP_003384927 |
Protein GI | 284034997 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 15 |
Plasmid unclonability p-value | 0.128014 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 28 |
Fosmid unclonability p-value | 0.217775 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGACTCATA ATCATAGAAT AGACATTACT GACTTTTGCG ATTCTTACAA TCCAATCGTA AAATCTTATG CCGTCGAATT TTTAAGCAAG ATTATGTCTT TAGAGGACAT CAGGACTTTA TTGTTCAATG ACGTTAATAC GAAAACGACA AAGGAAATAA TTGATTTTGC AGACCAGAGT TCAGACAACT ACCTTAGTTC ATTTATCTAT AGGCTAGTTG GAGTAAAAGA AATTATTTTT TGTAGGGAAA ATAGAGCTCA ACTTGACACA AATGAAGTTT GGAAGTTGAT ATCAAAATCA ATTAGGGTTA TCCCATCAGG ACTTACTATA TCATCAATTG GTTCACAAGG ATTTTTATCA ATACCGCTAT ACAAACAAGA CGCTTCGCTT GGAAATTTTG ATTTTATAAG ACTTCACATT TGGGATGATT CGCTTGATGA ATATATGGAT ATGAAGAAAT GCTTAGATTT TTCAATTCAT TCCCATACAT TCTTTGCAAA AAGTTGGATT ATTATCGGCA AAGTAAAAAA TGACAGATAT GAATATAAAA TAGATTCAAA TGGGACACAT TCTTTCTTTG AAGTTCAGTA TAACAAGTCT TTAAATGAAG TTAATCAGCA TACTTCTAAA GCTGTAAATA AAAATATTAA CGCTATACTT TTTAAAACTA GCGAGGAAAC TCATTTCTCT AAAGGAAATT ATGAAATTGA ACCGAGTAAA CTGCATCAAT CGGGTCATTT AAATTCACCT AATCCATCAG CCACATTTTT CTCTTTCACT GGAAAAGACG GTTTAGGAGA GTCTTTTGTA ATAGGCCCGA AAGATATTGC TGAGTCTGAA ATTAACAGGA AGATGAATAT TTCGCCAATT TACCTACTTG ATAAAATTGA TACACAAATA TGA
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Protein sequence | MTHNHRIDIT DFCDSYNPIV KSYAVEFLSK IMSLEDIRTL LFNDVNTKTT KEIIDFADQS SDNYLSSFIY RLVGVKEIIF CRENRAQLDT NEVWKLISKS IRVIPSGLTI SSIGSQGFLS IPLYKQDASL GNFDFIRLHI WDDSLDEYMD MKKCLDFSIH SHTFFAKSWI IIGKVKNDRY EYKIDSNGTH SFFEVQYNKS LNEVNQHTSK AVNKNINAIL FKTSEETHFS KGNYEIEPSK LHQSGHLNSP NPSATFFSFT GKDGLGESFV IGPKDIAESE INRKMNISPI YLLDKIDTQI
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