| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Slin_0054 |
|---|
| Symbol | |
|---|
| ID | 8723782 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Spirosoma linguale DSM 74 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013730 |
|---|
| Strand | - |
|---|
| Start bp | 66635 |
|---|
| End bp | 67147 |
|---|
| Gene Length | 513 bp |
|---|
| Protein Length | 170 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 30% |
|---|
| IMG OID | |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_003384926 |
|---|
| Protein GI | 284034996 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 16 |
|---|
| Plasmid unclonability p-value | 0.125239 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 28 |
|---|
| Fosmid unclonability p-value | 0.187529 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAACAAAT CGGAACTTCT TCTATTAGAC TGGATGAGAA AAATTCATCA ATTAGAATAT
GCACACTGTT ATCAATCTCT TTTTTACACC AATCTAGAAA AAAGGATTGG ATTATCATCA
TTTATCTTAA CTACTACAGT TGCTTTTACT TATAGATTCC CGTTTATTAA TTACCCTTGG
CTAAAAGAAT ATATTTTGCC TTTATTAGCA TTTATTGTCG CAATACTGAC AGGTTACCAA
ACATTCATCA AACCAGGAGA AAAATCTGAA ACGCATAGAA AACTTGGACT AGAATATGAG
AAAATTAGAC ACGATATAGA ACCTTTATAT TTATTAGCGT CCGACCCCCA GAATCCAGAA
TTGGAGATAA GAACCAAAGA GATTAAAAGC AAATGGGATT CATTAAATAC ATTGTATGTC
AACGAGTTCT ATTACAAAAA AGCAAAGGAA AAAGTGAAGT CATTTAATAA ATACCCTAAA
GAATTAGATT TTATACCAGA CAAAAAATCA TAA
|
|---|
| Protein sequence | MNKSELLLLD WMRKIHQLEY AHCYQSLFYT NLEKRIGLSS FILTTTVAFT YRFPFINYPW
LKEYILPLLA FIVAILTGYQ TFIKPGEKSE THRKLGLEYE KIRHDIEPLY LLASDPQNPE
LEIRTKEIKS KWDSLNTLYV NEFYYKKAKE KVKSFNKYPK ELDFIPDKKS
|
|---|
| |