Gene Slin_0054 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSlin_0054 
Symbol 
ID8723782 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSpirosoma linguale DSM 74 
KingdomBacteria 
Replicon accessionNC_013730 
Strand
Start bp66635 
End bp67147 
Gene Length513 bp 
Protein Length170 aa 
Translation table11 
GC content30% 
IMG OID 
Producthypothetical protein 
Protein accessionYP_003384926 
Protein GI284034996 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value0.125239 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones28 
Fosmid unclonability p-value0.187529 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAACAAAT CGGAACTTCT TCTATTAGAC TGGATGAGAA AAATTCATCA ATTAGAATAT 
GCACACTGTT ATCAATCTCT TTTTTACACC AATCTAGAAA AAAGGATTGG ATTATCATCA
TTTATCTTAA CTACTACAGT TGCTTTTACT TATAGATTCC CGTTTATTAA TTACCCTTGG
CTAAAAGAAT ATATTTTGCC TTTATTAGCA TTTATTGTCG CAATACTGAC AGGTTACCAA
ACATTCATCA AACCAGGAGA AAAATCTGAA ACGCATAGAA AACTTGGACT AGAATATGAG
AAAATTAGAC ACGATATAGA ACCTTTATAT TTATTAGCGT CCGACCCCCA GAATCCAGAA
TTGGAGATAA GAACCAAAGA GATTAAAAGC AAATGGGATT CATTAAATAC ATTGTATGTC
AACGAGTTCT ATTACAAAAA AGCAAAGGAA AAAGTGAAGT CATTTAATAA ATACCCTAAA
GAATTAGATT TTATACCAGA CAAAAAATCA TAA
 
Protein sequence
MNKSELLLLD WMRKIHQLEY AHCYQSLFYT NLEKRIGLSS FILTTTVAFT YRFPFINYPW 
LKEYILPLLA FIVAILTGYQ TFIKPGEKSE THRKLGLEYE KIRHDIEPLY LLASDPQNPE
LEIRTKEIKS KWDSLNTLYV NEFYYKKAKE KVKSFNKYPK ELDFIPDKKS