Gene Slin_0050 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSlin_0050 
Symbol 
ID8723778 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSpirosoma linguale DSM 74 
KingdomBacteria 
Replicon accessionNC_013730 
Strand
Start bp64815 
End bp65309 
Gene Length495 bp 
Protein Length164 aa 
Translation table11 
GC content31% 
IMG OID 
Producthypothetical protein 
Protein accessionYP_003384923 
Protein GI284034993 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value0.104101 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones27 
Fosmid unclonability p-value0.143319 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGGACAAT ACAGCGCAAA CTCGACAAAT TCTCGAAATT TTATTTTGAC CTTTGACAAC 
GAGAAACTAG GCGAATTAAT TTATCAAAAA TGGTATTCTT TTGCCGCTGA AATCCTAATG
AGTAATGGTA AAGAATATAC GCTTGAACCC AAAGGATTTT GGGATTCAAC TGTTGAATTA
AAAGAAGGAG AAGTGACCTT ATTAAAATTT AAAATGGGTT GGAAGGGTAT AATTATTAAA
ACATACTTCG ATAATGAAGA AAAACACTTT TTATTGAAAC TAAAAGGTCT TTTGGGCAAT
AAGTTTGTGC TACTTAATAA TGAAAATGAA GAGTTAATGG CAGCTGAAAC TGATTTTAAG
TGGAGCAAAC TCAACTTTGA TTATACTATT GAAACAAGCC CAAAATTTGA CAACTTTAGT
AATGAAAAGT TATTATTACT AACAGTATTA CATTGCATAA ATTACTATAT AACGGTTATC
GTCGCGGCAG CATAA
 
Protein sequence
MGQYSANSTN SRNFILTFDN EKLGELIYQK WYSFAAEILM SNGKEYTLEP KGFWDSTVEL 
KEGEVTLLKF KMGWKGIIIK TYFDNEEKHF LLKLKGLLGN KFVLLNNENE ELMAAETDFK
WSKLNFDYTI ETSPKFDNFS NEKLLLLTVL HCINYYITVI VAAA