Gene Slin_0047 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSlin_0047 
Symbol 
ID8723775 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSpirosoma linguale DSM 74 
KingdomBacteria 
Replicon accessionNC_013730 
Strand
Start bp60393 
End bp61808 
Gene Length1416 bp 
Protein Length471 aa 
Translation table11 
GC content57% 
IMG OID 
Productoxidoreductase domain protein 
Protein accessionYP_003384920 
Protein GI284034990 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones21 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones26 
Fosmid unclonability p-value0.145616 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTCATCCG ACAAAAAATC GCTTGTCACC CGGAGAAAGT TTCTCGATTT GACAGCTAAA 
GGAACTTTGG CTTCTACCGC CATTATCAGT GGTTTCCCGA CCATTGTCCC GGCTTCGGTA
TTCGGTAAAA ATGCCCCCAG CAACCGTATC AATATAGGGG CTATCGGTAC CGGCCGCATC
TCGCGAGGAC ACGACATGCC GGGCGTGTGG CAGTACGATA ATGCGCTCAT CATGGCCGTT
TGCGACCTCG ACAGCAACCG CGCTGAATCC GCCAAACAAC TCGTTAACGG CGTTTATGCC
AAGAAGACCG GCAAGGATTA CGACGGTGTT CGGGTCTATA CCGACTATCG GGAATTGCTG
CTGAATAAAG ACATCGACGC GGTGCTGGTC AGCACGCCCG ACCATTGGCA CGCGCCCATC
GTGATTGATG CCGTTCGGGC CAAGAAAGAT GTCTACATGC AGAAACCGGC TTCGCTCACC
ATTGCCGAAG GGCGCATGAT GGCCGATGCC GTAAAGAAAT CGGGGCAGAT TGTGCAGGTC
GGTAGCCAGC AGCGCTCATC GGAGCAGTTT CGCTATGCCG CCGAACTGGT CCGCAATGGT
CGGATCGGCA AGCTGAAAAC GGTGTACGTT GGTCTCCCCG GCGACCCCTC GGGCAATGAT
GAACCGCAGA TGCCCGTACC CAAAAACCTG AACTACGACA TGTGGCTGGG CACGACGCCC
GAGGTGTATT ATACCGAGAA ACGGGTGCAT CCGCAGGCCG ACTTCGATCG GCCCGGCTGG
CTCCGCTGTG AGCAGTTCGG GGCCGGGATG ATTACCGGCT GGGGTGCCCA CCACATTGAC
TCCGCCCACT GGGCCATGAA CACCGAGTAC ACCGGCCCGA TTGAAATCTG GGGAAAGGCC
GACTTTCCAA AACATGGCTT GTGGGATGTT CACGGCATCT TCCGCACCGA AGCCATGTAC
GAGAATGGCG TGCATATGAT CGTGACGAAC GAAATCGCGA ACGGTGTACG GTTTGAAGGA
ACGGAAGGCT GGATTTTCGT ATCGCGGGGT GATGCCGCTG TAACAGCCAG CGACCCGATT
GCCAAGCAGA ATGCCGCCAA GAAACTCGAC GCTAGCGACC CGAAAATCCT GACCTCGGTT
ATCGGCCCGA ATGAAATCCA CCTGCCCGTC AGCAAAGAGC ACCACGGCAA CTGGCTGGAG
AGCATCGTAA GCCGCAAAGA ACCCATTGCG CCTACCGAAG TGGGCCACCG CTCGTGTTCG
GCCTGTTTGC TGCACCACGC GGCCATGAAG CTGAACCGGA AACTCTACTG GGACCCCAAA
AAAGAACAGT TCAAAAACGA CCCCGAAGCG AACAAACTCC TGTCGCGCCC CCAGCGGGCT
CCGTATGCCA TCAAGATGGT GGCGTCGGCG AAGTAG
 
Protein sequence
MSSDKKSLVT RRKFLDLTAK GTLASTAIIS GFPTIVPASV FGKNAPSNRI NIGAIGTGRI 
SRGHDMPGVW QYDNALIMAV CDLDSNRAES AKQLVNGVYA KKTGKDYDGV RVYTDYRELL
LNKDIDAVLV STPDHWHAPI VIDAVRAKKD VYMQKPASLT IAEGRMMADA VKKSGQIVQV
GSQQRSSEQF RYAAELVRNG RIGKLKTVYV GLPGDPSGND EPQMPVPKNL NYDMWLGTTP
EVYYTEKRVH PQADFDRPGW LRCEQFGAGM ITGWGAHHID SAHWAMNTEY TGPIEIWGKA
DFPKHGLWDV HGIFRTEAMY ENGVHMIVTN EIANGVRFEG TEGWIFVSRG DAAVTASDPI
AKQNAAKKLD ASDPKILTSV IGPNEIHLPV SKEHHGNWLE SIVSRKEPIA PTEVGHRSCS
ACLLHHAAMK LNRKLYWDPK KEQFKNDPEA NKLLSRPQRA PYAIKMVASA K