Gene Slin_0045 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSlin_0045 
Symbol 
ID8723773 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSpirosoma linguale DSM 74 
KingdomBacteria 
Replicon accessionNC_013730 
Strand
Start bp57815 
End bp58840 
Gene Length1026 bp 
Protein Length341 aa 
Translation table11 
GC content50% 
IMG OID 
Producthypothetical protein 
Protein accessionYP_003384918 
Protein GI284034988 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones26 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones28 
Fosmid unclonability p-value0.242935 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCAGCGC AACCCGACAA CCCGCACGAC CGATTCTTTA AAGAGTCGTT TTCGCAGCCA 
GAGATTCTGA TCGACTTCTT GAACGCCTTC GCCCCGGAGG CCGTCCGCGA ACGTATCGAT
TACACAACTT TAACCCGTGA AGTCGATACG TTTACCGACG AGCAGTTAGC TGAGCATTTC
GCCGATCTCG TTTTTTCAGT GCAGTACAAT GGCCAGCCGA TTCGGCTTGT CATTTTGCTG
GAGCATAAAA GTTATACCGA AGAGTATCCG CACTTTCAGA TTAACCGGTA TTTGCTCAAC
CTCTGGGAGA GTCAGATCAA ACAAAAACAA CCGCTCACGC CCGTACTGCC TGTTCTGGTA
TACCACGGCA ACCGGCGCTG GAAACAACGG AGTATACCCG ACTACTTCGC TCCGCTGCAT
GAAACGCTGA CGCCATATCT ACCAGCGTTC GAGTATCTGC TGATCGACCT ATCGACGCTT
TCCGACGAAC GGCTGCCTAC CTTACAGTCC GATTACGCCC GACTTACCGC CATTCTATTG
CAAAACAGCC GTCGTAAACG CGAACTGACA CGCCTGTTGG ATGCCTTTGC CGACGTAGTC
CGTCGACTGA CGGATACCAC AGCCGGGCAA CGTTTCGTCA GTACGGGCTT TCTTTATTTG
TCATACACTG CCAACTTGAC CAAAGTTGAA CTATTTGGTA TATTTAGCCG TATTTCGTCA
AAAATAGAAT CGTCTACCAT GACAGTCGCC GAGGAATTAA TACAGGAAGG TCGCGAACTG
GAACGTCGCC AGACCAGGAT GGTCGCCGAG GAATTAATAC AGCAGGGCCG CGAACTGGAA
CGTCGCCAAG CCATGATGGC CGCTGAAGAA TTACTGAAGC AACAGGAACG CCAAAATAAG
ATCAAATTCA TCAAAGCTAT GCTGAATTTG AATCTGGATG CTGCAACCAT TGCAACAGCC
GCTGAACTGC CGCTGGCCGA AGTAGACGCT ATTATTATTG AGATTAACCG CACTCAGACA
ACATAA
 
Protein sequence
MAAQPDNPHD RFFKESFSQP EILIDFLNAF APEAVRERID YTTLTREVDT FTDEQLAEHF 
ADLVFSVQYN GQPIRLVILL EHKSYTEEYP HFQINRYLLN LWESQIKQKQ PLTPVLPVLV
YHGNRRWKQR SIPDYFAPLH ETLTPYLPAF EYLLIDLSTL SDERLPTLQS DYARLTAILL
QNSRRKRELT RLLDAFADVV RRLTDTTAGQ RFVSTGFLYL SYTANLTKVE LFGIFSRISS
KIESSTMTVA EELIQEGREL ERRQTRMVAE ELIQQGRELE RRQAMMAAEE LLKQQERQNK
IKFIKAMLNL NLDAATIATA AELPLAEVDA IIIEINRTQT T