| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Slin_0044 |
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| Symbol | |
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| ID | 8723772 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Spirosoma linguale DSM 74 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013730 |
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| Strand | - |
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| Start bp | 54189 |
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| End bp | 57635 |
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| Gene Length | 3447 bp |
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| Protein Length | 1148 aa |
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| Translation table | 11 |
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| GC content | 55% |
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| IMG OID | |
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| Product | isoleucyl-tRNA synthetase |
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| Protein accession | YP_003384917 |
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| Protein GI | 284034987 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 14 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 25 |
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| Fosmid unclonability p-value | 0.192264 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGATCCTCT CAGACGTGAA ATACCAGCAA TATGAGTCCC TCGATTATGC GCAGATCGCA
GCCGAGGTTT TAACGTACTG GAACCAGAAT CAGGTTTTCG AAAAGTCGGT TTCCATTCGC
GAAGGGAAGC CCAGCTTTAC CTTTTATGAA GGGCCGCCTT CGGCGAATGG AACGCCGGGT
ATTCACCACG TAATGGCCCG GTCGATCAAG GATATTTTTT GCCGTTACAA AACCCTCAAA
GGCTTTCAGG TCGAGCGGAA AGGCGGTTGG GATACCCACG GCCTGCCCAT TGAGCTACAG
GTCGAAAAAG AGTTAGGCAT CACCAAAGAC GATATCGGCA AACCCGAGTC GGAAGGCGGT
ATCAGCGTGG AAGAATACAA CCGCAAGTGC CGCGAAACGG TCATGCGCTT CACCGACCAG
TGGAACAGCC TGACCGAGAA GATGGGCTAT TGGGTCGACC TCGAAAACCC GTATATCACC
TATAAAAACG AATACATCGA GTCGGTATGG TCGCTGCTGA AAAAGCTGTA CGACCAGGAT
CTGCTCTACA AAGGCTATAC CATCCAGCCC TATTCGCCCA AAGCAGGAAC GGGCCTCAGC
TCGCACGAGC TGAACATGCC CGGCACCTAC AAGGACGTGC GCGACACGAC TATTGTGGCC
CAGTTTAAGG TGAAACCCAC CGGCAAATCG GGCTTTTTGT TCTTTGACTC GGCCGATGCC
GACGTGTATA TCCTGGCCTG GACCACCACG CCCTGGACAC TACCCGCCAA CTCAGCCTTG
ACCGTAGGCG CCAACATCGA CTATGTGCTG GTGAAAACCT TCAACCCCTA CACGCACATT
CCGGTACATG TGGTTCTGGC CAAAAACCTG GTTGGCCGCT GGCTGAACGA GAAAGGACAG
GTCGATGCGG TGAACAGTCC GGCGTTCGAT GCCTATCTGC CCAATGATAA AGTGATTCCC
TGGACGATTG TGTCTGAGTT TAAAGGTCAG CATCTGGAAG GTATCGAGTA TGAGCAATTG
ATGCCGTATG TCCAACCCGA TAAACCGGCG TTTAGAGTTA TCTTGGGCGA CTTCGTGACA
ACCGAAGACG GTACAGGTGT CGTGCATACG TCACCTACGT TTGGTGCCGA TGACTTCCGG
GTGGCACAGG CAGCAGGCAT CCCGGCTATC ATGGTGAAAG ACGAAACCGG CAAGGAAGTT
CCGGTTGTAG ACAAGCACGG CCAGTTTGTG AAGGAGATCG GTGAGTTTGG CGGTCGCTAT
GTCAAGGAAG AATATTATTC CGATGAGGAG CGCGAAGACC CGGAGTTCAA ACCGACCGAC
GTGCTCATTG CCATCAAGCT GAAAGAAGAG AACAAAGCCT TTCGGGTTGA GAAGTACGAA
CACCCTTACC CGCACTGCTG GCGGACGGAC AAACCGATTT TGTATTACCC ACTCGATAGC
TGGTTTATCC GCACGACGGC GAAGAAAGAC CGGCTCGTTG AACTGAACAA AACCATCAAC
TGGCAACCCG AAAGCACCGG CACCGGTCGC TTCGGCAACT GGCTCGAAAA CCTCGTCGAC
TGGAACCTCA GCCGCAGCCG TTTCTGGGGC ACTCCCCTGC CGATCTGGCG CAGCGAGAGT
GGCGAGGAAG TATGCGTGGG GTCAATTGAG GAGTTGACGG AACTGGCGAG TCAGGCGGTT
AGTTCGGGCA AATTGACGGA AGAGCAACAA GCCAAAAATA AATCGTTTAT CGATGCGGTT
GTAGCCCATA AGCTCAACCC AGAGATCGAA TTTGATCTCC ACCGGCCGTA CGTTGACGAA
ATCTATTTCG TTTCGGAAAG CGGGCAGGTG ATGCAGCGTG AGTCCGACCT GATCGACGTT
TGGTTCGATT CGGGCGCAAT GCCGTATGCC CAGTGGCATT ATCCGTTCGA GAATCAGGAT
GTATTTAACA AGGCATTCCC GGCTGATTTT ATCTCCGAGG GCGTCGACCA GACACGGGGC
TGGTTCTTCA CGCTGCACGC CATTGCCGGT ATGCTGTTCG ATTCGGTAGC GTTCAAAAAC
GTGGTGTCGA CGGGGCTGGT GCTGGATAAA AACGGCAACA AAATGTCGAA GCGGCTTGGC
AACGCGGTGA ATCCGTTCGA GACATTGGAC AAGTACGGGG CCGATGCCAC GCGCTGGTAC
ATGATTACCA ACGCCGAACC CTGGGATAAC CTGAAATTCA ATACGGACGG TATTGGCGAG
GTGCAGCGGA AACTGTTCGG CACGCTGTCG AACACCTATA ATTTCTTTGC CCTCTACGCT
AACCTCGACC AGTTCACGTT TGCCGGACGG ACCGTACCCG TAGCCGAACG CCCGGAACTC
GACCGCTGGA TTCTGTCCAA ACTGCAATCG CTGATCCTGG CCGTTGAGGA GCAGTTCGAC
AGTTATAACC CAACCAAAGC GGGTCGGCTG GTGCAGGATT TCGTGAACGA TCAACTGTCT
AACTGGTACG TTCGGTTATC ACGTCGGCGC TTCTGGACCG GGGCCGCGCC CGACGGTGAA
CTGACCACCG ACAAACGGGC GGCCTACGAA ACCCTGCACG AGTGTTTGTC GACAGTGTCA
CAACTGATGT CGCCGATTGC GCCGTTCTAC GCCGACTGGC TGTACCGGAA TCTGAACGAA
GGCGCGGTCT CCGTTCACCT GACCGATTTC CCCGTTGGTG ACCACACGCT GATCGATGCC
GAACTGGAAC GGTCGATGGA GTTAGCCCAG CAGGTGTCGT CGCTGGTTCA CTCGCTGCGC
AAGGGCCATA AGCTGAAAGT ACGTCAGCCG TTGAGCCGCG TGCTGGTACC CGTTCTGAAC
ACCGACACCC GCCGTCAGAT CGAGCACGTC ACGCCGATCA TCATGTCGGA GGTGAACGTA
AAGGCGGTTG AGTTTGTCGA CGATGCCAGC GGTATCCTTA AGAAGAAAGT GAAGCCGAAC
TTTAAGGCTC TCGGTCCTAA ATTCGGCAAG CAGATGAAAG ACGTAGCCGC CGGTATAACG
GCGATGAGCG CAGAGGAACT GAAGGGGCTG GAACAAACCG GCGAATTCGT TATACCATCG
CTCAACCAGT CCATCACCCT GGCCGATGTC GAAATACTGA CAGAAGACAT TCCGGGCTGG
CTGGTGGCCA GTGAAGACGG CATCACCGTG GCGCTGGACG TAACCCTAAG CGATGAACTG
CGTGGCGAAG GCATTGCCCG CGACTTTGTG AACCGGATTC AGAACCTGCG CAAAGACCGC
GACTTCTCGG TAACGGACAA GATTCGGATT ACGCTGGAAA ATAACCACGA CCTGCTCGCC
AAAGCGGTTG AAAGCAACAG CGCGTACATT CGGCAGGAAG TTCAGGCCGT TTCGCTCGAT
TTGGTGAACG ACCTAAACGG ATCACCGGCC GTAGCAGAGA TCGAAATGGA CGAGTTTCAG
TTACGCGTTC TTGTCGACAA GGCCTAG
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| Protein sequence | MILSDVKYQQ YESLDYAQIA AEVLTYWNQN QVFEKSVSIR EGKPSFTFYE GPPSANGTPG
IHHVMARSIK DIFCRYKTLK GFQVERKGGW DTHGLPIELQ VEKELGITKD DIGKPESEGG
ISVEEYNRKC RETVMRFTDQ WNSLTEKMGY WVDLENPYIT YKNEYIESVW SLLKKLYDQD
LLYKGYTIQP YSPKAGTGLS SHELNMPGTY KDVRDTTIVA QFKVKPTGKS GFLFFDSADA
DVYILAWTTT PWTLPANSAL TVGANIDYVL VKTFNPYTHI PVHVVLAKNL VGRWLNEKGQ
VDAVNSPAFD AYLPNDKVIP WTIVSEFKGQ HLEGIEYEQL MPYVQPDKPA FRVILGDFVT
TEDGTGVVHT SPTFGADDFR VAQAAGIPAI MVKDETGKEV PVVDKHGQFV KEIGEFGGRY
VKEEYYSDEE REDPEFKPTD VLIAIKLKEE NKAFRVEKYE HPYPHCWRTD KPILYYPLDS
WFIRTTAKKD RLVELNKTIN WQPESTGTGR FGNWLENLVD WNLSRSRFWG TPLPIWRSES
GEEVCVGSIE ELTELASQAV SSGKLTEEQQ AKNKSFIDAV VAHKLNPEIE FDLHRPYVDE
IYFVSESGQV MQRESDLIDV WFDSGAMPYA QWHYPFENQD VFNKAFPADF ISEGVDQTRG
WFFTLHAIAG MLFDSVAFKN VVSTGLVLDK NGNKMSKRLG NAVNPFETLD KYGADATRWY
MITNAEPWDN LKFNTDGIGE VQRKLFGTLS NTYNFFALYA NLDQFTFAGR TVPVAERPEL
DRWILSKLQS LILAVEEQFD SYNPTKAGRL VQDFVNDQLS NWYVRLSRRR FWTGAAPDGE
LTTDKRAAYE TLHECLSTVS QLMSPIAPFY ADWLYRNLNE GAVSVHLTDF PVGDHTLIDA
ELERSMELAQ QVSSLVHSLR KGHKLKVRQP LSRVLVPVLN TDTRRQIEHV TPIIMSEVNV
KAVEFVDDAS GILKKKVKPN FKALGPKFGK QMKDVAAGIT AMSAEELKGL EQTGEFVIPS
LNQSITLADV EILTEDIPGW LVASEDGITV ALDVTLSDEL RGEGIARDFV NRIQNLRKDR
DFSVTDKIRI TLENNHDLLA KAVESNSAYI RQEVQAVSLD LVNDLNGSPA VAEIEMDEFQ
LRVLVDKA
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