Gene Slin_0042 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSlin_0042 
Symbol 
ID8723770 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSpirosoma linguale DSM 74 
KingdomBacteria 
Replicon accessionNC_013730 
Strand
Start bp51177 
End bp53501 
Gene Length2325 bp 
Protein Length774 aa 
Translation table11 
GC content52% 
IMG OID 
Productmetallophosphoesterase 
Protein accessionYP_003384915 
Protein GI284034985 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones28 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones24 
Fosmid unclonability p-value0.0825488 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAATGTAC ATTTTTACCT ACCCATAAGT GTTCTTTTAG TCATTAGTCA ATTTGCTGGC 
GCTCAAGCCC CTAAACTCGT CAGGGGCCCC TATCTCCAGG TCGTCACCCC AACATCAGTC
GTCGTTCGCT GGCGTACCGA TCAGCCAATA ACGGGCCGGG TCTGGTTTGG CAGATCGGCA
AGCTCACTGA CAGAGAGCAT CCGCGAATCG CAGCCAGCCC TTGAGCACAG CCTGACCCTA
ACGGGCCTGC AAGCTGCCAC CCGGTATGCC TATGCCGTTG GCTTCGATGA TACCCAATTA
ACAAATGGAT CGGATTATTA CGTAAAAACA GCGCTACCCG CTGGAGATAC CAGACCTGTA
CGCTTATGGG CATTAGGCGA TTTCGGCAGC GGCTCGGAAA ACCAGCGAAA CGTTTATCAG
GCTTATCAGA AGGCTACAGC CAACCGCCCG GCCGACCTTT GGCTCTGGCT CGGCGATAAC
GCCTATTCAT TCGGCTTTGA GGATGAATTT CAGCAGTATG TGTTTTCCGT TTATCCACAA
ACGTTACGTA ACACACCACT TTTTATAACG CCCGGCAATC ACGATTACGC CGATAGTGAA
ACCAACTTCA ACGTCGCTTA TTACAAACTG TTTGCTTTCC CGGAAAAGGG TGAGGCTGGT
GGTGTCCCCT CCGATTCCAA GTCCTACTAT TCAGCCGATT ATGGCAATGT TCACCTCGTT
TCGCTCGACT CGCAGGGCCG GCCGGATGGA CAGTACCGGT TATATGACAC TACCTCTGCT
CAGGTACAGT GGTTAAAACG TGACCTGACG GCCAATAAAC TCCCGTGGAC AATCGTCATT
TTCCACCATC CCCCTTACAG CAAAGGCGGT CATAATTCCG ATACGCAGCT GTCCATGAAA
CTCCTGCGGG AAAATTTGAC CCCAATTCTG GAGCGATATG GCGTAGACCT GGTCCTGAAC
GGGCATAGCC ATGGCTACGA ACGAACTTAC CGGATTAAAG GCCTTCGGGG ATTGGCCAAT
ACATTCGACA AAGCAGATCA TATCGCCGAA ACGACAACGG GACGGTATGA TGGCTCACCC
AATTCCTGCC CCATTCTCAC CAAAGGCCAG GGTACCGTTT ATATCGTTAA TGGATCTGGC
GGGCAACTTG GTGGGCAATC TCCCGGCTTT CCGCACCCGG CCACCGTGTA TAACAACACA
ACACTTGGGG GTTCGATGCT GCTGGACATA ACCGATAACC GGCTGGACGC TCAGCTGGTA
ATGGCCGACG GCTCTGTGCA GGACAAGTTC ACCATCATGA AGAATGTGAA CAAAACAGCC
TCCTTAACGG CCGAATATGG CGATACGCTT CAGCTGACAG CCTCCTGGAT AGGCGACTAC
CGATGGCCGG ACGGCAAGAC CAGCCGAAGC ATCCGGTACG TGGCCGACCA GTCGGGTACA
ATTCCGATCG CTGTCACCGA CGATCGCCAG TGCCTGACCG ACCAGTTTAC CATCTCCGTA
CAACAACAGC CAAAATTGAC AACCAAAATA GCGGCCCCGG CTACTTTCTG CGCCGGAAGT
TCTGTTGCAT TCATCACCAC ACTTGAGAAC ACGACCAAAG CGGGTAGCTG GCAGTATGAT
GTGTTATTAT CCGATGCTTC GGGAAACTTC ACACCCGAAC AGGTCATTGG GTCAGGTACG
TTAAGTGCCC TGAAAGCCAC CCTACCCACT GGCATACTGC CCGGAACAGG CTATAAGCTA
CGGGTAAAAC CGCGTGGTAT TTCCTATGTT CAACTTATTG CGAGCGATGT TTTTACGGTA
AAACCAGCCC CAACAGCGAC CTTAACCGGC TCAACAACCG TGTTGCAGGG ACAATCGGTT
TCGCTAACAC TCAACTTCAC GGGCGATGGT CCCTGGCGAG GTAGCCTGTC GGACGGTACG
ACGTTTATAG GAGACATTAA CCCGACGATT GTGACGCGTC AACCCGAGAA AACTATCCAG
TATACAGTGA CGCGTGTTGA GAATAACTGT GGGGTAGGCA CCGCGTCGGG AGAGGCTACG
ATAATGGTAC TTCTCCCAAC GGCCGAACAA CCGTTTGCAG GTGGCCAGTT GAACGTTTAC
CCCAATCCGG CTCATGAACT GGTCTTCATT GAACTGGAAA CAACGCAAAA GAAAGACGTG
AGCCTGACAC TGTTCAATGC ACAGGGGCAC CCTGTATTTC AAAAGCAGTT TGGGCGGGTC
ACCTCAATTT CAGAATCCAT TCAACTACCC GCTGCGATGG GCGTATACCT GCTCACCATT
CAGGCCGGAC AAAGTAAAGT AGTCAGGAAA ATAGTGAAGC AGTAG
 
Protein sequence
MNVHFYLPIS VLLVISQFAG AQAPKLVRGP YLQVVTPTSV VVRWRTDQPI TGRVWFGRSA 
SSLTESIRES QPALEHSLTL TGLQAATRYA YAVGFDDTQL TNGSDYYVKT ALPAGDTRPV
RLWALGDFGS GSENQRNVYQ AYQKATANRP ADLWLWLGDN AYSFGFEDEF QQYVFSVYPQ
TLRNTPLFIT PGNHDYADSE TNFNVAYYKL FAFPEKGEAG GVPSDSKSYY SADYGNVHLV
SLDSQGRPDG QYRLYDTTSA QVQWLKRDLT ANKLPWTIVI FHHPPYSKGG HNSDTQLSMK
LLRENLTPIL ERYGVDLVLN GHSHGYERTY RIKGLRGLAN TFDKADHIAE TTTGRYDGSP
NSCPILTKGQ GTVYIVNGSG GQLGGQSPGF PHPATVYNNT TLGGSMLLDI TDNRLDAQLV
MADGSVQDKF TIMKNVNKTA SLTAEYGDTL QLTASWIGDY RWPDGKTSRS IRYVADQSGT
IPIAVTDDRQ CLTDQFTISV QQQPKLTTKI AAPATFCAGS SVAFITTLEN TTKAGSWQYD
VLLSDASGNF TPEQVIGSGT LSALKATLPT GILPGTGYKL RVKPRGISYV QLIASDVFTV
KPAPTATLTG STTVLQGQSV SLTLNFTGDG PWRGSLSDGT TFIGDINPTI VTRQPEKTIQ
YTVTRVENNC GVGTASGEAT IMVLLPTAEQ PFAGGQLNVY PNPAHELVFI ELETTQKKDV
SLTLFNAQGH PVFQKQFGRV TSISESIQLP AAMGVYLLTI QAGQSKVVRK IVKQ