Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Slin_0040 |
Symbol | |
ID | 8723768 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Spirosoma linguale DSM 74 |
Kingdom | Bacteria |
Replicon accession | NC_013730 |
Strand | + |
Start bp | 49436 |
End bp | 50056 |
Gene Length | 621 bp |
Protein Length | 206 aa |
Translation table | 11 |
GC content | 48% |
IMG OID | |
Product | Peroxiredoxin |
Protein accession | YP_003384913 |
Protein GI | 284034983 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 24 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 24 |
Fosmid unclonability p-value | 0.0496109 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAAAAAGA ATTTAGTTTT TACTTTAATC GGCGTCGTAG TGATTGCGAC CCTCACCAGT TTTATGTCAC TTTCAACACT CGTCAAAGGT ATCTTCAGCA ACAAAAGTGA AGCCATTGCA GCCCCTGCCA ATGCGGTTGC TCCCGCTAAA AGTCTGTACG ATTTCACTGT AAACTCACTC GATGGTAAGC CCGTAGCCCT GAAAGCCTAC AAAGGCAAAA AGGTCGTTAT CCTGAACGTC GCTTCGAAGT GTGGTTTCAC CCCACAGTAT GCCGACTGGG AGAAGTTCTA CAAAGAACAC GGTAATAAAA TTGTTGTGCT TGGCTTTCCT GCCAATAACT TTGGCAGCCA GGAGCCCGGC AGCAGCGAAG AAATCGCTAC CTTCTGCCAG AAGAACTATG GTGTAACCTT CCCCATGTTC GAGAAAGTAT CGGTACTGGG CGACGATCAG GCTCCTTTGT ACAAGTGGCT GACCGACAAG TCGATGAACG GCTGGAACGA CAAGGCGCCA ACCTGGAACT TCTGCAAATA CGTCATCAAC GAAAAAGGCG AACTGACGAA CTTCTTTGCT TCGAAAGTAA AGCCAACCGA CGAAGAGTTC AAAAAAGCTG TCGGCATCTA G
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Protein sequence | MKKNLVFTLI GVVVIATLTS FMSLSTLVKG IFSNKSEAIA APANAVAPAK SLYDFTVNSL DGKPVALKAY KGKKVVILNV ASKCGFTPQY ADWEKFYKEH GNKIVVLGFP ANNFGSQEPG SSEEIATFCQ KNYGVTFPMF EKVSVLGDDQ APLYKWLTDK SMNGWNDKAP TWNFCKYVIN EKGELTNFFA SKVKPTDEEF KKAVGI
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