Gene Slin_0040 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSlin_0040 
Symbol 
ID8723768 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSpirosoma linguale DSM 74 
KingdomBacteria 
Replicon accessionNC_013730 
Strand
Start bp49436 
End bp50056 
Gene Length621 bp 
Protein Length206 aa 
Translation table11 
GC content48% 
IMG OID 
ProductPeroxiredoxin 
Protein accessionYP_003384913 
Protein GI284034983 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones24 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones24 
Fosmid unclonability p-value0.0496109 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAAAAGA ATTTAGTTTT TACTTTAATC GGCGTCGTAG TGATTGCGAC CCTCACCAGT 
TTTATGTCAC TTTCAACACT CGTCAAAGGT ATCTTCAGCA ACAAAAGTGA AGCCATTGCA
GCCCCTGCCA ATGCGGTTGC TCCCGCTAAA AGTCTGTACG ATTTCACTGT AAACTCACTC
GATGGTAAGC CCGTAGCCCT GAAAGCCTAC AAAGGCAAAA AGGTCGTTAT CCTGAACGTC
GCTTCGAAGT GTGGTTTCAC CCCACAGTAT GCCGACTGGG AGAAGTTCTA CAAAGAACAC
GGTAATAAAA TTGTTGTGCT TGGCTTTCCT GCCAATAACT TTGGCAGCCA GGAGCCCGGC
AGCAGCGAAG AAATCGCTAC CTTCTGCCAG AAGAACTATG GTGTAACCTT CCCCATGTTC
GAGAAAGTAT CGGTACTGGG CGACGATCAG GCTCCTTTGT ACAAGTGGCT GACCGACAAG
TCGATGAACG GCTGGAACGA CAAGGCGCCA ACCTGGAACT TCTGCAAATA CGTCATCAAC
GAAAAAGGCG AACTGACGAA CTTCTTTGCT TCGAAAGTAA AGCCAACCGA CGAAGAGTTC
AAAAAAGCTG TCGGCATCTA G
 
Protein sequence
MKKNLVFTLI GVVVIATLTS FMSLSTLVKG IFSNKSEAIA APANAVAPAK SLYDFTVNSL 
DGKPVALKAY KGKKVVILNV ASKCGFTPQY ADWEKFYKEH GNKIVVLGFP ANNFGSQEPG
SSEEIATFCQ KNYGVTFPMF EKVSVLGDDQ APLYKWLTDK SMNGWNDKAP TWNFCKYVIN
EKGELTNFFA SKVKPTDEEF KKAVGI