| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Slin_0035 |
|---|
| Symbol | |
|---|
| ID | 8723763 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Spirosoma linguale DSM 74 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013730 |
|---|
| Strand | - |
|---|
| Start bp | 41332 |
|---|
| End bp | 43455 |
|---|
| Gene Length | 2124 bp |
|---|
| Protein Length | 707 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 56% |
|---|
| IMG OID | |
|---|
| Product | ATP-dependent DNA helicase RecQ |
|---|
| Protein accession | YP_003384908 |
|---|
| Protein GI | 284034978 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 13 |
|---|
| Plasmid unclonability p-value | 0.142382 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 23 |
|---|
| Fosmid unclonability p-value | 0.0608085 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGACCGTTT CAACAGCCCA TACCCAGCAG CCCGCCGATT ACCTCAAACG CTATTATGGT
TACGACCGCT TCCGGCCCAT GCAGGAAGCC ATCATCCAGT CGATCCTGAG TGGTCGTGAC
ACGGTAGTAC TGATGCCTAC GGGAGGTGGC AAGTCGGTCT GTTTCCAGAT TCCGGCCCTG
ATGCTGCCGG GTCTGACGGT GGTGGTTTCG CCCCTGATCG CCCTCATGAA AGACCAGGTG
GGTGCGCTGC ATATGAACGG TATTCAGGCC GCTTTTTACA ACAGCACCCA AACCAGCCGG
GAACAGCGCG AAATCGAAAA CGACTGCATT AGCGGCAAGC TCAAACTCCT CTATGTTTCG
CCCGAGAAGC TGCTCACCGA ATCGTTTTTC CAATTCCTGA GCCTGACTAA CCTGTCGCTG
TTCGCCATTG ACGAAGCGCA CTGTATTTCC TCCTGGGGGC ACGACTTCCG GCCAGAATAC
ACCCAACTGC ACGTTCTGAA AGAGCAGTTT CCAACAGTGC CAACCATTGC CCTGACGGCA
ACCGCCGACA AACTTACCCG GCAGGACATT GCCACCCGGC TCGGCATGAA CGACCCGGCT
ATTTTTGTGG ACTCCTTTAA CCGCAAAAAC CTGAGCTTGC AGGTGCTGCC GGGCCAGAAC
CGCATCCAGC AGATTATCCG GCTGCTTCAG CAGAAACCCG ACACCTCGGG AATTATTTAC
TGCCTCAGCC GGAAATCGAC CGAATCTTTG GCAGCCAAGT TGCAGGAAAA AGGATTTAGT
GCGGCTTTTT ACCACGCCAA AATGGACCCC GACGACCGCT CCAAAACCCA GGAGGCCTTC
CTGCGCGACG ACGTTCGGAT TATATGCGCC ACCATTGCCT TCGGGATGGG GATCGACAAA
TCGAACGTGC GGTGGGTTAT TCATTATAAC ATGCCCAAGA ACATCGAAAG CTTTTATCAG
GAAATCGGGC GGGCCGGTCG GGATGGCGCG GCTGCCCAAA CCGTCCTGTT TTACAGCTTT
GCCGATGTAG CAACGTATAA GGACATGCTG GCCGAAAACA ACCCGGCCAA CCTCGGCTTG
CAGCTGGCTA AGCTGGAACG AATGCAGCAG TACGCCGATG CACATACCTG CCGCCGACAA
ATTCTGCTGT CTTACTTCTC GGAAGAACTG CCCGACCCCT GTGGCAACTG CGACGTTTGC
CGCGACCCGC GCGTTACCTT CGATGGCACC GTTCTGGCCC AGAAAGCCCT TTCGGCCATC
ATCCGCACGG GCGAACGGGT TCCGATGAAC CTGCTGATCG ACATCCTGCG CGGCTCCCGC
AGCCAGCAGG TGCTGCAAGG TGGCTACGAC CAGATAAAAA CCTACGGGGC AGGCCGCGAT
ATTCGGTTCG AAGACTGGCG GAGCTACATC CACCAGCTCA TTAATATCGG CGTTATCGAG
ATTGCCTACG AACAGCATTA CGCCCTTCGG CGCGGTATCC TGGCCGATCA GGTATTGTAT
AAAGGACGAA AAATTGACCT CGTCCGCCCG GATGATGCGC CCAAACCGGT GGTTGAGAAA
ACGCGGGCGA AGACCGAAAC CCAGCGCGAC GACCTCTTCG AACGGCTTCG GGTACTGCGC
AAGCAACTCG CCGACGAGCA GAACGTTCCG GCTTATGTTA TTTTCACGGA TACCACGCTC
GAAGACATGG CCCGGCAGCG CCCCACCGCC CCCGACGCCC TGCGGAATGT GAGTGGTGTT
GGCGAGCGGA AACTGCAACT CTTCGGCAAG CGCTTTCTGG AGGAAATTGT CGGGCATGTA
CGCGGCCGGG TGGAGGCTGG TGAAAAGCCG AAAGGATCGA CCCAGCTCAT TACCCTCGAT
TTGTATAACG ACGGCCTCAC CATCGAAGAA ATTGCTGCCC GTCGACAGCT CACAACGGGG
TCTGTGGCGG GGCATTTGGT TCAGTTGGCG AAGGCCGGAT ACGATATTGA TTTAGTCTCG
CTCGTCGACC CTTTTGAACG GCGCGAAATA GAGAAGGCAA TTGGGGTTGT GGGTATGGAA
GAAGGCCGTT TAAAGCCCGT ATTCGACTAT TTGGAAGGTC GATACGATTA CGGCAAACTA
ACGCTGGTCG CCGGGCTTTT ATAG
|
|---|
| Protein sequence | MTVSTAHTQQ PADYLKRYYG YDRFRPMQEA IIQSILSGRD TVVLMPTGGG KSVCFQIPAL
MLPGLTVVVS PLIALMKDQV GALHMNGIQA AFYNSTQTSR EQREIENDCI SGKLKLLYVS
PEKLLTESFF QFLSLTNLSL FAIDEAHCIS SWGHDFRPEY TQLHVLKEQF PTVPTIALTA
TADKLTRQDI ATRLGMNDPA IFVDSFNRKN LSLQVLPGQN RIQQIIRLLQ QKPDTSGIIY
CLSRKSTESL AAKLQEKGFS AAFYHAKMDP DDRSKTQEAF LRDDVRIICA TIAFGMGIDK
SNVRWVIHYN MPKNIESFYQ EIGRAGRDGA AAQTVLFYSF ADVATYKDML AENNPANLGL
QLAKLERMQQ YADAHTCRRQ ILLSYFSEEL PDPCGNCDVC RDPRVTFDGT VLAQKALSAI
IRTGERVPMN LLIDILRGSR SQQVLQGGYD QIKTYGAGRD IRFEDWRSYI HQLINIGVIE
IAYEQHYALR RGILADQVLY KGRKIDLVRP DDAPKPVVEK TRAKTETQRD DLFERLRVLR
KQLADEQNVP AYVIFTDTTL EDMARQRPTA PDALRNVSGV GERKLQLFGK RFLEEIVGHV
RGRVEAGEKP KGSTQLITLD LYNDGLTIEE IAARRQLTTG SVAGHLVQLA KAGYDIDLVS
LVDPFERREI EKAIGVVGME EGRLKPVFDY LEGRYDYGKL TLVAGLL
|
|---|
| |