| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Slin_0034 |
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| Symbol | |
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| ID | 8723762 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Spirosoma linguale DSM 74 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013730 |
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| Strand | - |
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| Start bp | 40076 |
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| End bp | 41143 |
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| Gene Length | 1068 bp |
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| Protein Length | 355 aa |
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| Translation table | 11 |
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| GC content | 54% |
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| IMG OID | |
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| Product | Lytic transglycosylase catalytic |
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| Protein accession | YP_003384907 |
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| Protein GI | 284034977 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 18 |
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| Plasmid unclonability p-value | 0.312775 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 25 |
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| Fosmid unclonability p-value | 0.0969684 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGCCGCTA TAAAACCGGG CATCGGTATG TCGGCCCTTG CGCTCCCCAA CTTCGGGGCC
GACACGAGCC GGTCACTGTT GTCATCAGGT GGTCTGAATA ACCCCGAACT ACTTGTCGTA
GACTCGACAA AGCGCGTATT TCCAATCTAC TTTTGCGGGG AAGAGGTTCC GGTCGATGAA
CCCCGCGTAT CGCGCCGGTG GCTGCAAACC CTTCGTCTGT ACGGTGCCCA GCAGGACTTT
CTGATGGACC TTCGGTCGAG GGCGTCTACG TTCTTCCCCA TCATTGACCC TATTCTTCGT
AAGTATAAAA TCCCCCGCGA TTTCCGGTTT ATGCCTCTGG CGGAAAGTGC GCTCGACAAC
AGCAGTGTCT CCTATAAAGG GGCATCGGGC TATTGGCAGC TCATGCCGGG AACAGCCCGC
GAACTGGGAT TAACGGTAAA TAGTACGGTG GATGAACGAT ACAACCTGCA AAAAGCAACG
GTTGCCGTTT GTCGGCATCT TCACCAATTG TACCGGGAGT TAGGTTCCTG GACGCTGGTT
GCAGCCGCTT ATAACGGAGG AATCACCCAC GTTCGAAACA AAATGGAGCA GCAGGGCCAG
TCCAACTACT TCCGGCTCCG GCTGCATCGG GAAACGAGCC ATTACCTGTT CAGAATTCTG
GCGTTTAAAG AACTGCTCAG TAACCCGCGC CAGTACGCTT TGCTGGTTAG CGGAGCAACC
ATCGCCGAAC TTGTCAAGCC ATTACCGAGC TGGCATAAGC CACTTGCCTT ACCGAAGAAA
GTAAAAGACG CGCCAACAAT CGAACTGGTC GATGAGGAGT TCATGAACAC CTGGGGCCCG
CGCCCTAATA CGGCGCTAAC GCAGGCTCCA TCCGATGCAC AACAGTTTAT TGCCCAGGCC
GTTGCGGCAA AGAGTCTGCC AAACACCGAT CTTGAACAGC AGGGAAAGCA CTTACCCATA
AAAAAGTTGA TGATGGGGCT GATGGTGCTC CGGTTCCGCC GACCACGTCT CCTGGACAGG
AAGAAAGGTG AGGGCATTCG TCCCTTACAT TTCTGGGACT GGTTGTAG
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| Protein sequence | MAAIKPGIGM SALALPNFGA DTSRSLLSSG GLNNPELLVV DSTKRVFPIY FCGEEVPVDE
PRVSRRWLQT LRLYGAQQDF LMDLRSRAST FFPIIDPILR KYKIPRDFRF MPLAESALDN
SSVSYKGASG YWQLMPGTAR ELGLTVNSTV DERYNLQKAT VAVCRHLHQL YRELGSWTLV
AAAYNGGITH VRNKMEQQGQ SNYFRLRLHR ETSHYLFRIL AFKELLSNPR QYALLVSGAT
IAELVKPLPS WHKPLALPKK VKDAPTIELV DEEFMNTWGP RPNTALTQAP SDAQQFIAQA
VAAKSLPNTD LEQQGKHLPI KKLMMGLMVL RFRRPRLLDR KKGEGIRPLH FWDWL
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