| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Slin_0032 |
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| Symbol | |
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| ID | 8723760 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Spirosoma linguale DSM 74 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013730 |
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| Strand | - |
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| Start bp | 37215 |
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| End bp | 38456 |
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| Gene Length | 1242 bp |
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| Protein Length | 413 aa |
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| Translation table | 11 |
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| GC content | 54% |
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| IMG OID | |
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| Product | Lytic transglycosylase catalytic |
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| Protein accession | YP_003384905 |
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| Protein GI | 284034975 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 30 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 29 |
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| Fosmid unclonability p-value | 0.367331 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCGCATGG TCGTACTGAT GTTAAGTGGT TTACTGCTGA ACATCCCTAT CTCGGCGCAA
AAAAAGGCGA GTACGGCAAA GAACAGGCCC AATCTTTCTT CTGCTCATAA ACGTTCGTTA
AGCGGACCGG GACGTCTGCA CTTCTGCGGT GAAGTCGTAC CAACTGAACA GGGTAACGTT
TCGGCCAAGC TGGCCTTTGC CATGGCGAGC AGTTCGGGAT ATGCCCGTCG CCTGAATGCC
CTGAAGGCCC GTTCGGCTCC TTTCTTCTCC GTTATCGAGC CTATTCTTGA GCGGTACGGT
ATCCCGGATG ATTTTAAGTA CCTGCCCCTG ATCGAGAGTG CCTGGCAGGC CAACGCCGTA
TCCTCGGCCG GAGCGGTTGG CTACTGGCAG TTTATGGACG ATACCGCACA GGATATGGGG
CTGTCGATTG CCCCCGGCCA TGATGAACGC ACCAACCTCC TCAAATCAAC CGAAGCCGCC
TGCAAATACA TCAATTTCCT GTACCGCAAA TTAGGGTCAT GGACGCTTGT GGCCGCAGCC
TACAATGGGG GCGTGGGCAT GGTTCAACGG AAAATCACCA AAGTGGGCCA TCGCGATTAT
TATACCATGG CCATGAATCC CGAAACCGGC TATTATCTCT ACCGTATTCT GGCCATGAAA
CAGCTATTCA CGAATCCCTC CTATGGGATC GACGCGGTGG GCCTGATGCT GGCATCGGGT
GGTAACGCCT ACGAACAGGA GCGCGAACAG GCCCGGCGAA TGGGCTGGCT TCAGGACCAG
GAACCAGCAG TGAGCGGGAT TCCGGTCGAG TCGTTGTCGG GTCCGGATGC TTTGCTAAAC
GATCAGGTAC CAACGGGCCG ACATGAAGTG GTGGTTATGG ACAGTTTGTT AAGCAAACTA
CTTAAAAACA CGCCCAGTAG CCCCTCTGCC GTTGTTGGCG ATGTAGCTGC GCGTCTGGTA
CAGGCGGGTC AGGTGAAAGT AGGCCAAAGC TGGTCATTTG CACTCACCGA GACGGTCCAG
ATCGACGAAA GTACGCTCAA GGCGGGCGAT ATGCTTTACG CTATTATCGA TGATATTGAT
ACCTACGGCA ATCTTTTCTT TCGGGCGACC AAAGCCATCT CGGCACAAAC CAAAACGACT
ATTCCGCTTA CACTCATCGC GCTGAACCCG GCAACCGGTT TAGCCGGTAT TCCGCGCCCC
AAAGTGGTAA AACCTGGCTG GGTAGTGCAA TGGAAACTTT AA
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| Protein sequence | MRMVVLMLSG LLLNIPISAQ KKASTAKNRP NLSSAHKRSL SGPGRLHFCG EVVPTEQGNV
SAKLAFAMAS SSGYARRLNA LKARSAPFFS VIEPILERYG IPDDFKYLPL IESAWQANAV
SSAGAVGYWQ FMDDTAQDMG LSIAPGHDER TNLLKSTEAA CKYINFLYRK LGSWTLVAAA
YNGGVGMVQR KITKVGHRDY YTMAMNPETG YYLYRILAMK QLFTNPSYGI DAVGLMLASG
GNAYEQEREQ ARRMGWLQDQ EPAVSGIPVE SLSGPDALLN DQVPTGRHEV VVMDSLLSKL
LKNTPSSPSA VVGDVAARLV QAGQVKVGQS WSFALTETVQ IDESTLKAGD MLYAIIDDID
TYGNLFFRAT KAISAQTKTT IPLTLIALNP ATGLAGIPRP KVVKPGWVVQ WKL
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