| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Slin_0030 |
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| Symbol | |
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| ID | 8723758 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Spirosoma linguale DSM 74 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013730 |
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| Strand | + |
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| Start bp | 33811 |
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| End bp | 36171 |
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| Gene Length | 2361 bp |
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| Protein Length | 786 aa |
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| Translation table | 11 |
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| GC content | 54% |
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| IMG OID | |
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| Product | TonB-dependent receptor plug |
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| Protein accession | YP_003384903 |
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| Protein GI | 284034973 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 21 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 32 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGGATTAC GGCTACTCCT GTTTCTCTTC TTTTTTTTCC TGGGCTTTTG CTCATCTGCT
GTAGCCCAGC AGCGACTTCG GCTGAGTATT GTTGTTCGGG ACGGCATCAC CCGAAAGCCA
ATTTCCGGCG CCAGCTTATT TATTGCTGAA ACAAAACTGG GAGGACGGGC CGATAGTGCC
GGGGTTATTT CAATTACCCA TCCACCGGGA GTACTCACGG CCTACGTGTC GGCAGTGGGC
TATTTTCGCG GTCGTGAAAC GGTCGTCCTT GATTTTAACA AACGAGTCGA GTATTACCTG
CAACCCCGCT CAACGGATCT GGATGAGGTT GATGTACGCG CCATTCGCAA GGACAAAAAC
ATCAAGGATG TGCAGATGGG ACAGATTCAA CTCAGTATGC CCGAGTTGAA ACGGATGCCG
GTTGTCCTGG GCGAACCGGA TATTCTGAAA GCACTGTCCC TACAGGCCGG TGTTACAACG
GCGGGCGAAG GAGCGGGGGG CTTTAATGTC CGGGGCGGAC GGGCCGATCA GAACCTGGTA
CTGGTTGATG GAGCCCCCCT GTTCAACACA TCGCACCTGC TGGGCTTCTA CACAAACATT
AATCCCGATA TGGTGCAGGA CGTGAGTCTA AGCAAAGGGG CTTTTTCGGC GCAGTACGGC
GGTCGGGTAT CCTCGTTGCT CCTCATGAGT ACCCGAAATG GCAATAAAGA TGGCTGGCGG
GTGTCGGGTG GGGTGAGCCC GGTGAGTGTG CGGGCGGTGG TGGACGGACC AATTACAAAA
AAGCTGACTT TACTCGCTGG CGGGCGCATT GCCTTCCCGA ACTACCTGCT ACAGTTATTT
CCAACGACAA GCGTCAAAAA CAGCCGGGCT TTCTTCTACG ATGGCAATCT TAAACTAACG
TATACACCCG ACGAACGCAA TACCATTTCG CTCTCGGCCT ATCGGAGTCA GGATAACTTT
CGATTTCCGG GTGACACCCT GTACGGCTGG CAATCGAATG TGCTGACGGG CCGCTGGAGT
TACTTGATTC GACCCAATAT GCAGCTCAAT CTGGCCGCTT TGTATAGCGG TTATTACCTC
AACGTTGACG GCGTAACGCC TAATCTGGGT TTCCGCTTCA CCTCGCATAT CGAGCAGCGG
GAAGGGAAAG CGGATGTCTT TTATACGATT GCAAAGAAGC ATAAAGTTCA GGTCGGTGTC
AACGGCATTC TGTACGGTAT CCAGACGGGG GCAATTCAGC CAGCGGGCAA TCTGTCCAGT
ATTAATCCCA AACAGGTGAA CCCCGAACGG GGGCGTGAGC TGGGGGCTTA CGTGAATACC
GAGTGGGAGT TGATGCCCGC CGTGACTCTG ATGGCTGGGC TTCGCTATTC GGCCTTTGCC
ATGCTGGGGC CCCAAACGGT TTACGGTTAT GCGGAGAATG TGCCCGTCTC TCCGGAAACC
GTAACCGACT CGGTGCTCTA CCGTTCGGGT CAGGTGGCGC AGGCGTATGG CGGTTTTGAG
CCCCGGCTGG CCCTGCGCGT GCAACTGGCT AAACATACGG CCATCAAAGC CAGTGCCGGT
CGGACGCGCC AGTATCTGAA CCTTATCTCC AATACAACCG CCATTACACC CCTCGATTTC
TGGAAACTGA GCGACCGCTA CCAGCGCCCT CAGATTGCCG ACCAGGTATC GCTGGGGATA
TTTCAGAACT TTCTGGATAA CGGGCTCGAG CTAAGTGTGG AAGGGTATTA CAAACGGCTT
CAGAATCAGA TCGAATACCG ATACGGAGCT GACCTCATCC TTAATCCGAA ACTCGAAACA
GCCCTGGTGC AGGCCGCCGG AAAAGCCTAC GGAGTTGAAC TGGGCCTGAG CAAAACCAGC
GGACGACTGA CCGGACAGCT TAACTATACG TACGCCCGCT CGCTGATTGC GGTGCAAACG
GCGTTCGATG CCCTCCGCAT CAATGGTGGT GCGTATTATC CTGCCTACAT CGACCGGCCC
CATACGGTCA ATGTGCAGGC CCGCTGGTCG ATGTCGCACA ACTGGTCGTT TTCGAGCAAT
TTTGTTTATT ATACCGGTGT ACCGGCCACC TATCCCGACG GGCAGTATAC GTATAACGGT
GAGCCGGTAC AGGACTATTC CCGCCGGAAT GCTGACCGGA TTCCCGATTA CCACCGGCTG
GACGTTGCCT TCTCCAAAGA TACCCGCTTC AATAAAGCGC AAAAGCGGTA CGGAATCTGG
ACGCTGGGTA TCTACAACCT GTACGCGCAC AAGAATCCGT ACTCCATTTA TTTTACCCGG
TTTAACCAGC GCACCGAATC GTACCGGCTG TCGGTATTTG GTACGATGAT CCCATCCATC
GCTTACAACT TCTTCTTTTA G
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| Protein sequence | MGLRLLLFLF FFFLGFCSSA VAQQRLRLSI VVRDGITRKP ISGASLFIAE TKLGGRADSA
GVISITHPPG VLTAYVSAVG YFRGRETVVL DFNKRVEYYL QPRSTDLDEV DVRAIRKDKN
IKDVQMGQIQ LSMPELKRMP VVLGEPDILK ALSLQAGVTT AGEGAGGFNV RGGRADQNLV
LVDGAPLFNT SHLLGFYTNI NPDMVQDVSL SKGAFSAQYG GRVSSLLLMS TRNGNKDGWR
VSGGVSPVSV RAVVDGPITK KLTLLAGGRI AFPNYLLQLF PTTSVKNSRA FFYDGNLKLT
YTPDERNTIS LSAYRSQDNF RFPGDTLYGW QSNVLTGRWS YLIRPNMQLN LAALYSGYYL
NVDGVTPNLG FRFTSHIEQR EGKADVFYTI AKKHKVQVGV NGILYGIQTG AIQPAGNLSS
INPKQVNPER GRELGAYVNT EWELMPAVTL MAGLRYSAFA MLGPQTVYGY AENVPVSPET
VTDSVLYRSG QVAQAYGGFE PRLALRVQLA KHTAIKASAG RTRQYLNLIS NTTAITPLDF
WKLSDRYQRP QIADQVSLGI FQNFLDNGLE LSVEGYYKRL QNQIEYRYGA DLILNPKLET
ALVQAAGKAY GVELGLSKTS GRLTGQLNYT YARSLIAVQT AFDALRINGG AYYPAYIDRP
HTVNVQARWS MSHNWSFSSN FVYYTGVPAT YPDGQYTYNG EPVQDYSRRN ADRIPDYHRL
DVAFSKDTRF NKAQKRYGIW TLGIYNLYAH KNPYSIYFTR FNQRTESYRL SVFGTMIPSI
AYNFFF
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