| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Slin_0027 |
|---|
| Symbol | |
|---|
| ID | 8723755 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Spirosoma linguale DSM 74 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013730 |
|---|
| Strand | + |
|---|
| Start bp | 29890 |
|---|
| End bp | 31419 |
|---|
| Gene Length | 1530 bp |
|---|
| Protein Length | 509 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 52% |
|---|
| IMG OID | |
|---|
| Product | Esterase/lipase-like protein |
|---|
| Protein accession | YP_003384900 |
|---|
| Protein GI | 284034970 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 11 |
|---|
| Plasmid unclonability p-value | 0.0272532 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 31 |
|---|
| Fosmid unclonability p-value | 0.692184 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | TTGCTTTCGC TAGCCGGTTT AGGGCTAATT ACCCCGGTAT CAGCTCAGTC CGGAAAGTCG
ATTCATCGGT TTGCCGATGA GGTTTTCCCG CGCTTCGATA CCCTCAACAA CGTTGTTTAC
GGACAGGCCA TCAACCTGAA AGGACAGTCT GAAACGTTGA AACTCGATCT TTTTCTGCCA
GAAAAAGGCG ATACTCTGCG TAAGCGCCCG TTGTTAATTT TTATTCATGG GGGAGGGTTC
CAGAACAACG ATAAGGTGGG TGCGTTTAGC TCGATGGTCT GTAGCAGTAT GGCTCGGCGG
GGTTACGTGG CCAGTTCCAT CAATTACCGG CTGGGACTGA CCGCATCCAA AAGTGACACG
GCCTACTTCG ATGCCTTATA CCGCGCCGTG CAGGACGCCA AAGCCGCCGT TCGGTTCTTC
CGAAAAAATG CTGATTTGTA CGGCATTGAC CCCGATCAGA TTTTCGTGAT GGGTAGTTCG
GCGGGATCAA AAACGGCGAT GCACTTAGCC TATTTAGATC AGAGTGAGGT GCCGTCCTGG
GTTGATACAA AACGGCTGGG AACGCTGGAA GGCATTAGTG GCAACCCTGG CTATTCGTCG
AAGGTGCGCG GGGTTATTAA CTGCTGGGGA GCCATGATTG ATTACCGCTG GATGCAGCCG
GGCGATGCCC CCATTTTTAA TGTACATGGC ATGGCCGATG TAACGGTGGC GTACGATTCG
TCATTCAGCT ACCACGGATT CCGACATGGC AGCACTATTC TGTACGACCA CGCCCTGAAA
ATGGGTATTC CGACGGGCCT TCAACTGTTC GAAAAAACCG GACATACGCT GGATAATGAC
AAAGTTAAAC AACAGGCTGC GCTGGGTGAA ATCAGTCACT GGCTGTTCAC CCAACTGCTA
CAGAACGAGC CGAAAAACGG GCCGGAAGTA TTCAAGTGGT CGACGGAAGT ACAGCAGTTA
ACACATCTCG ATTCAACGAC GAAAGACCCC CAAAACGCCA TTCTGTTTTC GGGCAGTTCC
TATATTCGTC GCTGGACAAC CATCGCCCGC GATCTGGCGC CTATTCCGAT TATTCACCGG
GGGTATGGTG GTGCCAAGCT CAACGATTTC GCCTATTACA TTAGCCGCAT CGTGAAGGCG
CACAGACTCA AAGCCGCCGT GTTTTACGTG GGGAATGACA TTGTTGGTGT TCTCGTCGAC
AAAACGCCGT TGCAGGTGCT GAATCTGGTT AAAAACGTTA CTCGCCAGGT GCAAGCCATT
CACCCTGACC TGCCGATTTT CTGGATTCAG GTATCGCCGA ACCCCAAGCG CTGGCCTGTA
TGGGACCAGA CCAGTGCCGC CAACGAGCTA ATCCGGCAAT ATTGTGAGCA AACGCCGAAT
CTTCATTTCA TCGAGACGGC CTATACCTTT CTGGGGCCCG ATGGCAAACC GATTCCGTCG
TTGTACGATG CTGATACCCT GCATCTGAAC GAAGCGGGGT ACAAACGCTG GGCTGTTATT
ATCAAAAAAA GCTTGATGGT GCTTAAGTAA
|
|---|
| Protein sequence | MLSLAGLGLI TPVSAQSGKS IHRFADEVFP RFDTLNNVVY GQAINLKGQS ETLKLDLFLP
EKGDTLRKRP LLIFIHGGGF QNNDKVGAFS SMVCSSMARR GYVASSINYR LGLTASKSDT
AYFDALYRAV QDAKAAVRFF RKNADLYGID PDQIFVMGSS AGSKTAMHLA YLDQSEVPSW
VDTKRLGTLE GISGNPGYSS KVRGVINCWG AMIDYRWMQP GDAPIFNVHG MADVTVAYDS
SFSYHGFRHG STILYDHALK MGIPTGLQLF EKTGHTLDND KVKQQAALGE ISHWLFTQLL
QNEPKNGPEV FKWSTEVQQL THLDSTTKDP QNAILFSGSS YIRRWTTIAR DLAPIPIIHR
GYGGAKLNDF AYYISRIVKA HRLKAAVFYV GNDIVGVLVD KTPLQVLNLV KNVTRQVQAI
HPDLPIFWIQ VSPNPKRWPV WDQTSAANEL IRQYCEQTPN LHFIETAYTF LGPDGKPIPS
LYDADTLHLN EAGYKRWAVI IKKSLMVLK
|
|---|
| |