Gene Slin_0024 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSlin_0024 
Symbol 
ID8723752 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSpirosoma linguale DSM 74 
KingdomBacteria 
Replicon accessionNC_013730 
Strand
Start bp26272 
End bp27069 
Gene Length798 bp 
Protein Length265 aa 
Translation table11 
GC content49% 
IMG OID 
ProductIon transport protein 
Protein accessionYP_003384897 
Protein GI284034967 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones13 
Plasmid unclonability p-value0.0306194 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones37 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTCACACC TCCGCAAATC GTTATACCGG GTTCTTGAGA CCTCGGCGGG AAAGCGTCGG 
GGCATAAGCC TCGCGTTCAA CCTCCTCCTG ATCACTATTA TTACCCTGAA TGCCATTGCC
ATTGTACTGC ACACAGTACC CGAGTACGAC CGACAATTTG CCGTTCTTTT CACGGATTTT
GAAGTTTTCT CCGTCGTTTT TTTTACCATC GAGTACATCA TGCGCATCTG GGTTTGTGTC
GAGAATGAAA AATATAGCCA TTGGTTTTGG GGACGTTTAC ATTATATTTT CTCCACCAGC
GCCATCATCG ACTTCCTGGC TATCTTCCCA TTTTATTTCA CGCTCTTCGC CACCGATCTG
GCCATTGTCC GCATTCTGCG GCTATTCCGT ATTTTCCGGC TCTTCCGAAT CTCCCGTTAT
TCCCACGCAT TCCGCCTGAT TCAGAATGTT GTTACCGAGA AAAAAGAAGA ACTGATACTG
AGCACCATGC TCGTCATTTT CATGCTGATC ATTGTATCGA GCGTGATGTA CTACGTGGAG
CACGCGGCCC AACCCGATCA GTTTTCGAGT ATTCCGGCCA CCATGTGGTG GGGTGTTACG
GCCATGACAA CCGTTGGTTA CGGTGATATT CACCCCATTA CGCCGTTAGG AAAGCTACTT
GGTGGCATTA CGGCTATACT GGGTATTGGA TTATTTGCCC TGCCAACGGG TATTCTGGTT
TCGGGTTTTA ACGAGCACAT CCGCGACCGC AAAGCTCCCC AGCGAAAAGT ATGCCCCCAT
TGCGGGAAGG AGATTTGA
 
Protein sequence
MSHLRKSLYR VLETSAGKRR GISLAFNLLL ITIITLNAIA IVLHTVPEYD RQFAVLFTDF 
EVFSVVFFTI EYIMRIWVCV ENEKYSHWFW GRLHYIFSTS AIIDFLAIFP FYFTLFATDL
AIVRILRLFR IFRLFRISRY SHAFRLIQNV VTEKKEELIL STMLVIFMLI IVSSVMYYVE
HAAQPDQFSS IPATMWWGVT AMTTVGYGDI HPITPLGKLL GGITAILGIG LFALPTGILV
SGFNEHIRDR KAPQRKVCPH CGKEI