Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Slin_0024 |
Symbol | |
ID | 8723752 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Spirosoma linguale DSM 74 |
Kingdom | Bacteria |
Replicon accession | NC_013730 |
Strand | - |
Start bp | 26272 |
End bp | 27069 |
Gene Length | 798 bp |
Protein Length | 265 aa |
Translation table | 11 |
GC content | 49% |
IMG OID | |
Product | Ion transport protein |
Protein accession | YP_003384897 |
Protein GI | 284034967 |
COG category | |
COG ID | |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 13 |
Plasmid unclonability p-value | 0.0306194 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 37 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGTCACACC TCCGCAAATC GTTATACCGG GTTCTTGAGA CCTCGGCGGG AAAGCGTCGG GGCATAAGCC TCGCGTTCAA CCTCCTCCTG ATCACTATTA TTACCCTGAA TGCCATTGCC ATTGTACTGC ACACAGTACC CGAGTACGAC CGACAATTTG CCGTTCTTTT CACGGATTTT GAAGTTTTCT CCGTCGTTTT TTTTACCATC GAGTACATCA TGCGCATCTG GGTTTGTGTC GAGAATGAAA AATATAGCCA TTGGTTTTGG GGACGTTTAC ATTATATTTT CTCCACCAGC GCCATCATCG ACTTCCTGGC TATCTTCCCA TTTTATTTCA CGCTCTTCGC CACCGATCTG GCCATTGTCC GCATTCTGCG GCTATTCCGT ATTTTCCGGC TCTTCCGAAT CTCCCGTTAT TCCCACGCAT TCCGCCTGAT TCAGAATGTT GTTACCGAGA AAAAAGAAGA ACTGATACTG AGCACCATGC TCGTCATTTT CATGCTGATC ATTGTATCGA GCGTGATGTA CTACGTGGAG CACGCGGCCC AACCCGATCA GTTTTCGAGT ATTCCGGCCA CCATGTGGTG GGGTGTTACG GCCATGACAA CCGTTGGTTA CGGTGATATT CACCCCATTA CGCCGTTAGG AAAGCTACTT GGTGGCATTA CGGCTATACT GGGTATTGGA TTATTTGCCC TGCCAACGGG TATTCTGGTT TCGGGTTTTA ACGAGCACAT CCGCGACCGC AAAGCTCCCC AGCGAAAAGT ATGCCCCCAT TGCGGGAAGG AGATTTGA
|
Protein sequence | MSHLRKSLYR VLETSAGKRR GISLAFNLLL ITIITLNAIA IVLHTVPEYD RQFAVLFTDF EVFSVVFFTI EYIMRIWVCV ENEKYSHWFW GRLHYIFSTS AIIDFLAIFP FYFTLFATDL AIVRILRLFR IFRLFRISRY SHAFRLIQNV VTEKKEELIL STMLVIFMLI IVSSVMYYVE HAAQPDQFSS IPATMWWGVT AMTTVGYGDI HPITPLGKLL GGITAILGIG LFALPTGILV SGFNEHIRDR KAPQRKVCPH CGKEI
|
| |