Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Slin_0020 |
Symbol | |
ID | 8723748 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Spirosoma linguale DSM 74 |
Kingdom | Bacteria |
Replicon accession | NC_013730 |
Strand | + |
Start bp | 17739 |
End bp | 18857 |
Gene Length | 1119 bp |
Protein Length | 372 aa |
Translation table | 11 |
GC content | 50% |
IMG OID | |
Product | hypothetical protein |
Protein accession | YP_003384893 |
Protein GI | 284034963 |
COG category | |
COG ID | |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 19 |
Plasmid unclonability p-value | 0.641333 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 39 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | TTGTCCATTC TAAAAAATAC GCTTCTCATT CTGAGCGGGC TTGTCCTTTC CCTGACGGCT CCGGCGCAAG TGCTGACCGA TCCGGCGGTT CAGCAAACGG TTCTGAAAAC ACTGGACAAT ATTTATAATC TCGACTTTGC CGAATCCGAT GTACAGATTC GACAGATTCA GAGCCGGTTT CCTCAGCACC CGATCGGGCC TATTTTGCGG GCTACCGAAC TGGAACTTCA GTACCTGCCA GTGCATGAGA ACAAGGCGGC ATCTGTGCAG TTCATACAGG CCGTAGAGCA GGGATTGGCA CTGGCGAAGA AAATGCTTGA TAAGGACGAG AACGACCCGG AAGGTGTGTT CTTTGCGTTG ACGGCGCATA GCTATCTGGC TTCTTTTTAC AACAATAAAA ATGAATCGCT GAAAGCCGTT GGCGAGTCCA AAAAGGCGTA CAACTACCTT CGGGATGGCT TTGTGCTGAT GAACAAAACG CCGGATTTCT ATTTCACAAC CGGACTTTAT AATTACTATA TAGAACGCTA CCCAATGGAT CATTCCATTG TCAAGCCGTT TCTGGTTTTC TTTGAGCGTG GCGACATGGC GAAAGGACTG AAGCAGATGG ACGTAGCCGC CCAAAAAGCC ATTTTCCTGC GTCCGGTAGC CAACTATTAT CTGGCGCATA TTTTAGTGAA GCACGAAATG AGTCCCAGCC GGGCGGTTGT TTATGCTAAA TCGCTAGCCG ATAAGTATCC CAATAATCCA TTATTTGGCA TGCTGGGGGC CGAATCACTC CTGCTGGCAG GCCGATACAA TGAAGCCCGC CCGTACGTAC AACGGCTAAA ACACATGTCC AACAAACTGG TGCCTATGGC CGTGCATACG TTTAGCGGGA TGCTGGCCGA GTATGCCGAT AAAAACGATG TGGCAGCAGC TGAATCCTAT GAAACAGCCC TCCGCCTGCC GTTCAATGAA CCATATACCA AAGAGTACCA CGCGTTTGCC TATGCCGGTT TAGCCCGAAT TGCTGCCCGC GCCAACGATA CAAACCGGGC TCGTATTTTC TACAAAAAAG CACTTGCCGC AGGTCAGTAC AAAGCGCTGA TCCGCGAGGC CAAAGCGTAT AAGGGTTAG
|
Protein sequence | MSILKNTLLI LSGLVLSLTA PAQVLTDPAV QQTVLKTLDN IYNLDFAESD VQIRQIQSRF PQHPIGPILR ATELELQYLP VHENKAASVQ FIQAVEQGLA LAKKMLDKDE NDPEGVFFAL TAHSYLASFY NNKNESLKAV GESKKAYNYL RDGFVLMNKT PDFYFTTGLY NYYIERYPMD HSIVKPFLVF FERGDMAKGL KQMDVAAQKA IFLRPVANYY LAHILVKHEM SPSRAVVYAK SLADKYPNNP LFGMLGAESL LLAGRYNEAR PYVQRLKHMS NKLVPMAVHT FSGMLAEYAD KNDVAAAESY ETALRLPFNE PYTKEYHAFA YAGLARIAAR ANDTNRARIF YKKALAAGQY KALIREAKAY KG
|
| |