Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Slin_0015 |
Symbol | |
ID | 8723743 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Spirosoma linguale DSM 74 |
Kingdom | Bacteria |
Replicon accession | NC_013730 |
Strand | - |
Start bp | 15164 |
End bp | 15643 |
Gene Length | 480 bp |
Protein Length | 159 aa |
Translation table | 11 |
GC content | 55% |
IMG OID | |
Product | 2C-methyl-D-erythritol 2,4-cyclodiphosphate synthase |
Protein accession | YP_003384888 |
Protein GI | 284034958 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 14 |
Plasmid unclonability p-value | 0.0237994 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 39 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAAAATAC GAGTAGGACA GGGATATGAT GTGCACCGGC TGGAAGAAGG CCGCGCCTTC TGGCTGGGTG GCATCCAGAT TCCGAGTACA TTTGGCCCGG TAGGCCATTC CGATGCCGAC GTGGTATGCC ATGTACTCTG CGATGCCCTG CTGGGTGCCG CCAACATGCG CAATATCGGT TACCATTTTT CGGATAAAGA CCCACGCTGG AAAGGCGTCG ACAGCAAACT ACTGCTGGCC GAAGTACTGC GGATGGTGCG CGAAGCAGGC TACGAAATTT CCAACGTCGA CGTAACGGTG GTGTTGCAGG AGCCAAAGCT CAACCCACAT ATTCCGGCCA TGAAAACCTG TCTGGCCGGG GTCATGGCCA TTCCCGAAGA CGATATCTCC ATTAAAGCCA CCACCTCCGA ACACATTGGC TTTGTTGGCC GGGGCGAGGG CATTGCCGCG CATTGTGTGG CGCTTATCTT TAAGGATTAG
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Protein sequence | MKIRVGQGYD VHRLEEGRAF WLGGIQIPST FGPVGHSDAD VVCHVLCDAL LGAANMRNIG YHFSDKDPRW KGVDSKLLLA EVLRMVREAG YEISNVDVTV VLQEPKLNPH IPAMKTCLAG VMAIPEDDIS IKATTSEHIG FVGRGEGIAA HCVALIFKD
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