Gene Slin_0015 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSlin_0015 
Symbol 
ID8723743 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSpirosoma linguale DSM 74 
KingdomBacteria 
Replicon accessionNC_013730 
Strand
Start bp15164 
End bp15643 
Gene Length480 bp 
Protein Length159 aa 
Translation table11 
GC content55% 
IMG OID 
Product2C-methyl-D-erythritol 2,4-cyclodiphosphate synthase 
Protein accessionYP_003384888 
Protein GI284034958 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value0.0237994 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones39 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAAATAC GAGTAGGACA GGGATATGAT GTGCACCGGC TGGAAGAAGG CCGCGCCTTC 
TGGCTGGGTG GCATCCAGAT TCCGAGTACA TTTGGCCCGG TAGGCCATTC CGATGCCGAC
GTGGTATGCC ATGTACTCTG CGATGCCCTG CTGGGTGCCG CCAACATGCG CAATATCGGT
TACCATTTTT CGGATAAAGA CCCACGCTGG AAAGGCGTCG ACAGCAAACT ACTGCTGGCC
GAAGTACTGC GGATGGTGCG CGAAGCAGGC TACGAAATTT CCAACGTCGA CGTAACGGTG
GTGTTGCAGG AGCCAAAGCT CAACCCACAT ATTCCGGCCA TGAAAACCTG TCTGGCCGGG
GTCATGGCCA TTCCCGAAGA CGATATCTCC ATTAAAGCCA CCACCTCCGA ACACATTGGC
TTTGTTGGCC GGGGCGAGGG CATTGCCGCG CATTGTGTGG CGCTTATCTT TAAGGATTAG
 
Protein sequence
MKIRVGQGYD VHRLEEGRAF WLGGIQIPST FGPVGHSDAD VVCHVLCDAL LGAANMRNIG 
YHFSDKDPRW KGVDSKLLLA EVLRMVREAG YEISNVDVTV VLQEPKLNPH IPAMKTCLAG
VMAIPEDDIS IKATTSEHIG FVGRGEGIAA HCVALIFKD